RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 RTKNQ9BST9 563 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 KLHL11Q9NVR0 708 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 HERC5Q9UII4 1024 aaKnown RBP11.62□□□□□ -0.55
PCAT29-201ENST00000558411 COQ6Q9Y2Z9 468 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 TEX264Q9Y6I9 313 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 FUOMA2VDF0 154 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 HMOX2P30519 316 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 ELK3P41970 407 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 GTF2BQ00403 316 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 MTMR2Q13614 643 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 ZFYVE27Q5T4F4 411 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 ELMSAN1Q6PJG2 1045 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 C15orf52Q6ZUT6 534 aaKnown RBP11.62□□□□□ -0.55
PCAT29-201ENST00000558411 AMIGO2Q86SJ2 522 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 CLEC10AQ8IUN9 316 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 DLG3Q92796 817 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 RANBP9Q96S59 729 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 C11orf70Q9BRQ4 267 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 EIF2AQ9BY44 585 aaKnown RBP11.62□□□□□ -0.55
PCAT29-201ENST00000558411 C20orf27Q9GZN8 174 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 ZNF395Q9H8N7 513 aaPredicted RBP11.62□□□□□ -0.55
PCAT29-201ENST00000558411 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.62□□□□□ -0.55
PCAT29-201ENST00000558411 KIAA1522Q9P206 1035 aaPredicted RBP11.62□□□□□ -0.55
PCAT29-201ENST00000558411 VPS28Q9UK41 221 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 CDH7Q9ULB5 785 aa11.62□□□□□ -0.55
PCAT29-201ENST00000558411 SCN4AP35499 1836 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.61□□□□□ -0.55
PCAT29-201ENST00000558411 CCDC195A0A1B0GUA6 201 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 SOBPA7XYQ1 873 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 KBTBD13C9JR72 458 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 TRDMT1O14717 391 aaKnown RBP11.61□□□□□ -0.55
PCAT29-201ENST00000558411 CLASP2O75122 1294 aaKnown RBP11.61□□□□□ -0.55
PCAT29-201ENST00000558411 RFPL1O75677 317 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 BAIAP3O94812 1187 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 PDGFRBP09619 1106 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 PSMC3P17980 439 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 STT3AP46977 705 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 NOMO3P69849 1222 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 TXNL4AP83876 142 aaKnown RBP11.61□□□□□ -0.55
PCAT29-201ENST00000558411 TGFBIQ15582 683 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 SNRNP35Q16560 246 aaKnown RBP11.61□□□□□ -0.55
PCAT29-201ENST00000558411 ZNF829Q3KNS6 432 aaPredicted RBP11.61□□□□□ -0.55
PCAT29-201ENST00000558411 ATP13A4Q4VNC1 1196 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 WDR78Q5VTH9 848 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 CHERPQ8IWX8 916 aaKnown RBP11.61□□□□□ -0.55
PCAT29-201ENST00000558411 SCAIQ8N9R8 606 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 TAS1R2Q8TE23 839 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 TFB1MQ8WVM0 346 aaKnown RBP11.61□□□□□ -0.55
PCAT29-201ENST00000558411 USP6NLQ92738 828 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 WDR11Q9BZH6 1224 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 CYP4F11Q9HBI6 524 aa11.61□□□□□ -0.55
PCAT29-201ENST00000558411 FAM32AQ9Y421 112 aaKnown RBP11.61□□□□□ -0.55
PCAT29-201ENST00000558411 MYH9P35579 1960 aaKnown RBP11.61□□□□□ -0.55
PCAT29-201ENST00000558411 BMP10O95393 424 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 H6PDO95479 791 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 C1QAP02745 245 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 P4HBP07237 508 aaKnown RBP11.6□□□□□ -0.55
PCAT29-201ENST00000558411 DSG3P32926 999 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 BCAP31P51572 246 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 GK3PQ14409 553 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 FSCBQ5H9T9 825 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 C6orf52Q5T4I8 152 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 PAOXQ6QHF9 649 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 IGDCC3Q8IVU1 814 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 CYP2W1Q8TAV3 490 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 HM13Q8TCT9 377 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 NLRP7Q8WX94 980 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 RSAD2Q8WXG1 361 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 TRIM56Q9BRZ2 755 aaKnown RBP11.6□□□□□ -0.55
PCAT29-201ENST00000558411 APOL6Q9BWW8 343 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 FRMD8Q9BZ67 464 aaPredicted RBP11.6□□□□□ -0.55
PCAT29-201ENST00000558411 PALMDQ9NP74 551 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 TRPV5Q9NQA5 729 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 C1orf112Q9NSG2 853 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 IVNS1ABPQ9Y6Y0 642 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 RGPD3A6NKT7 1758 aaPredicted RBP11.6□□□□□ -0.55
PCAT29-201ENST00000558411 RGPD4Q7Z3J3 1758 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 TCRBV7S3A2A0A539 114 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 TMEM191CA6NGB0 347 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 KRT38O76015 456 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 SERPINB2P05120 415 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 TMEM191BP0C7N4 346 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 COL6A2P12110 1019 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 PRKCHP24723 683 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 STAT2P52630 851 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 GDF10P55107 478 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 YWHAGP61981 247 aaKnown RBP eCLIP11.6□□□□□ -0.55
PCAT29-201ENST00000558411 PSMC5P62195 406 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 PDPK2PQ6A1A2 396 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 PADI6Q6TGC4 694 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 FRMD7Q6ZUT3 714 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 FBXO11Q86XK2 927 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 ABRAQ8N0Z2 381 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 ZSWIM2Q8NEG5 633 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 SNX27Q96L92 541 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 MFSD14AQ96MC6 490 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 ZNF778Q96MU6 729 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 TCHPQ9BT92 498 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 SELENONQ9NZV5 590 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms