RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 DAAM1Q9Y4D1 1078 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 CPQQ9Y646 472 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 EP300Q09472 2414 aaPredicted RBP8.92□□□□□ -0.98
TPM1-213ENST00000558400 VPS13AQ96RL7 3174 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 F5P12259 2224 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 A0A1W2PQH9 124 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 TRDMT1O14717 391 aaKnown RBP8.91□□□□□ -0.98
TPM1-213ENST00000558400 SART1O43290 800 aaKnown RBP8.91□□□□□ -0.98
TPM1-213ENST00000558400 FBXO21O94952 628 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 CAVIN2O95810 425 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 DCNP07585 359 aaKnown RBP8.91□□□□□ -0.98
TPM1-213ENST00000558400 RARGP13631 454 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 TARSP26639 723 aaKnown RBP8.91□□□□□ -0.98
TPM1-213ENST00000558400 USP8P40818 1118 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 TYRO3Q06418 890 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 TNK2Q07912 1038 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 GRSF1Q12849 480 aaKnown RBP eCLIP8.91□□□□□ -0.98
TPM1-213ENST00000558400 ARHGAP44Q17R89 818 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 EML3Q32P44 896 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 FBXO43Q4G163 708 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 PREPLQ4J6C6 727 aaPredicted RBP8.91□□□□□ -0.98
TPM1-213ENST00000558400 MIIPQ5JXC2 388 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 C10orf120Q5SQS8 335 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 CDKAL1Q5VV42 579 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 BTBD8Q5XKL5 378 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 CAVIN1Q6NZI2 390 aaKnown RBP8.91□□□□□ -0.98
TPM1-213ENST00000558400 NUDT18Q6ZVK8 323 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 HTR3DQ70Z44 454 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 GPRIN1Q7Z2K8 1008 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 DGLUCYQ7Z3D6 616 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 SIX6OS1Q8N1H7 587 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 TTC16Q8NEE8 873 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 UBA3Q8TBC4 463 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 IRGQQ8WZA9 623 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 TFAP2BQ92481 460 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 SHC3Q92529 594 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 KAT5Q92993 513 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 NKD2Q969F2 451 aaPredicted RBP8.91□□□□□ -0.98
TPM1-213ENST00000558400 CNTNAP3BQ96NU0 1288 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 BPIFA3Q9BQP9 254 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 TRIM62Q9BVG3 475 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 CNTNAP3Q9BZ76 1288 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 FOXQ1Q9C009 403 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 DCLK3Q9C098 648 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 LINC00597Q9H2U6 94 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 CCSER2Q9H7U1 834 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 PLCB1Q9NQ66 1216 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 HPS4Q9NQG7 708 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 ABCC13Q9NSE7 274 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.91□□□□□ -0.98
TPM1-213ENST00000558400 FANCLQ9NW38 375 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 SMPD4Q9NXE4 827 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 DLGAP2Q9P1A6 1054 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 TMEM63CQ9P1W3 806 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 CFAP97Q9P2B7 532 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 LSM7Q9UK45 103 aaKnown RBP8.91□□□□□ -0.98
TPM1-213ENST00000558400 DNAJC12Q9UKB3 198 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 STRIP2Q9ULQ0 834 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 NDRG2Q9UN36 371 aaKnown RBP8.91□□□□□ -0.98
TPM1-213ENST00000558400 CEP250Q9BV73 2442 aa8.91□□□□□ -0.98
TPM1-213ENST00000558400 SHISA7A6NL88 538 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 M0QYV0 167 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 CYP26A1O43174 497 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 LAMTOR5O43504 91 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 ATG13O75143 517 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 ADH1CP00326 375 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 CHRNB1P11230 501 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 DRD1P21728 446 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 GNA15P30679 374 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 GJA4P35212 333 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 KRT9P35527 623 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 CHKAP35790 457 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 YWHAGP61981 247 aaKnown RBP eCLIP8.9□□□□□ -0.98
TPM1-213ENST00000558400 ZXDBP98169 803 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 FZD5Q13467 585 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 KRT31Q15323 416 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 HSP90AA4PQ58FG1 418 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 TMEM196Q5HYL7 178 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 KLHDC7AQ5VTJ3 777 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 TRIM68Q6AZZ1 485 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 RSRC2Q7L4I2 434 aaKnown RBP8.9□□□□□ -0.98
TPM1-213ENST00000558400 SCD5Q86SK9 330 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 ZNF687Q8N1G0 1237 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 RNF139Q8WU17 664 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 GOLGA1Q92805 767 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 NOX5Q96PH1 765 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 P2RY13Q9BPV8 354 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 KLF16Q9BXK1 252 aaPredicted RBP8.9□□□□□ -0.98
TPM1-213ENST00000558400 STK33Q9BYT3 514 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 VPS16Q9H269 839 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 LHX5Q9H2C1 402 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 CHRDQ9H2X0 955 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 SEMA4AQ9H3S1 761 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 FBXO4Q9UKT5 387 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 MTF2Q9Y483 593 aaPredicted RBP8.9□□□□□ -0.98
TPM1-213ENST00000558400 WNT6Q9Y6F9 365 aa8.9□□□□□ -0.98
TPM1-213ENST00000558400 DMXL1Q9Y485 3027 aa8.89□□□□□ -0.99
TPM1-213ENST00000558400 BECN2A8MW95 431 aa8.89□□□□□ -0.99
TPM1-213ENST00000558400 FOXN3O00409 490 aaPredicted RBP8.89□□□□□ -0.99
TPM1-213ENST00000558400 THAP12O43422 761 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms