RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 LTFP02788 710 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 SKILP12757 684 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 ZXDBP98169 803 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 GOLGA8FQ08AF8 430 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 GOLGA8DPQ0D2H9 430 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 KLHL30Q0D2K2 578 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 ZNF77Q15935 545 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 CLEC16AQ2KHT3 1053 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 C10orf120Q5SQS8 335 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 BSPRYQ5W0U4 402 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 BTBD8Q5XKL5 378 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 HGSNATQ68CP4 663 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 FAM183BPQ6ZVS7 135 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 ZNF276Q8N554 614 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 BPIFB1Q8TDL5 484 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 DEPDC1BQ8WUY9 529 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 CPA5Q8WXQ8 436 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 EDEM1Q92611 657 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 SYN2Q92777 582 aaPredicted RBP15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 MRFAP1L1Q96HT8 127 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 ZFRQ96KR1 1074 aaKnown RBP15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 NACA2Q9H009 215 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 HAUS4Q9H6D7 363 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 DUSP12Q9UNI6 340 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 SART1O43290 800 aaKnown RBP15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 MFAP3LO75121 409 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 UNGP13051 313 aaPredicted RBP15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 TCF3P15923 654 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 PSMC3P17980 439 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 ATP5C1P36542 298 aaKnown RBP15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 CENPCQ03188 943 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 TBX2Q13207 712 aaPredicted RBP15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 C2CD6Q53TS8 623 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 TDRD12Q587J7 1177 aaKnown RBP15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 OR6B2Q6IFH4 312 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 KLHDC10Q6PID8 442 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 OLFML1Q6UWY5 402 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 ZNF571Q7Z3V5 609 aaPredicted RBP15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 ERICH1Q86X53 443 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 MFSD6LQ8IWD5 586 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 TTC16Q8NEE8 873 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 SLC30A5Q8TAD4 765 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 SH3RF2Q8TEC5 729 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 FAM149B1Q96BN6 582 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 SYNCQ9H7C4 482 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 ABCC13Q9NSE7 274 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 RASAL2Q9UJF2 1139 aa15.56■□□□□ 0.08
VIPAS39-210ENST00000557466 LEFTY2O00292 366 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 DLL1O00548 723 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 SRFP11831 508 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 TNFAIP3P21580 790 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 GABRB2P47870 512 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 FCHO2Q0JRZ9 810 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 EFEMP1Q12805 493 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 MTF1Q14872 753 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 MMS22LQ6ZRQ5 1243 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 RSRC2Q7L4I2 434 aaKnown RBP15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 TADA2BQ86TJ2 420 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 XYLT1Q86Y38 959 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 MSANTD4Q8NCY6 345 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 GOLGA1Q92805 767 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 WBP2Q969T9 261 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 C18orf8Q96DM3 657 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 ASIC4Q96FT7 647 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 CDK5RAP1Q96SZ6 601 aaKnown RBP15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 DNAJC7Q99615 494 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 C11orf70Q9BRQ4 267 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 TRMT61BQ9BVS5 477 aaKnown RBP15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 KLF16Q9BXK1 252 aaPredicted RBP15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 CFAP97Q9P2B7 532 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 DNMT3LQ9UJW3 386 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 NCOR1O75376 2440 aa15.55■□□□□ 0.08
VIPAS39-210ENST00000557466 TNFRSF10AO00220 468 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 SCAMP3O14828 347 aaKnown RBP15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 DCXO43602 365 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 SERPING1P05155 500 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 FYNP06241 537 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 PLEKP08567 350 aaPredicted RBP15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 TPM1P09493 284 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 IRF1P10914 325 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 MMP8P22894 467 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 GDI1P31150 447 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 HNRNPH3P31942 346 aaKnown RBP15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 NSFP46459 744 aaKnown RBP15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 SNX16P57768 344 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 GPC5P78333 572 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 PTP4A2Q12974 167 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 ARID5BQ14865 1188 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 TAF5Q15542 800 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 MSANTD2Q6P1R3 559 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 TOGARAM2Q6ZUX3 1019 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 PHF13Q86YI8 300 aaPredicted RBP15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 MIB1Q86YT6 1006 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 YAF2Q8IY57 180 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 RNF139Q8WU17 664 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 ZFYVE19Q96K21 471 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 GKN1Q9NS71 199 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 OLA1Q9NTK5 396 aaKnown RBP15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 MARCH2Q9P0N8 246 aa15.54■□□□□ 0.08
VIPAS39-210ENST00000557466 DDX3XO00571 662 aaKnown RBP eCLIP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms