RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 ARHGEF4Q9NR80 690 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 TMEM74BQ9NUR3 256 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 CGNQ9P2M7 1197 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 NXF1Q9UBU9 619 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 CHORDC1Q9UHD1 332 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 PLXND1Q9Y4D7 1925 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 C1QTNF9BB2RNN3 333 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 ALDH1A2O94788 518 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 KIF20AO95235 890 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 VNN1O95497 513 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 TOP3BO95985 862 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 C4BPAP04003 597 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 C1QTNF9P0C862 333 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 DHPSP49366 369 aaPredicted RBP11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 SLC5A3P53794 718 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 GAD2Q05329 585 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 KDSRQ06136 332 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 ZNF252P-AS1Q0IIN9 211 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 MORC3Q14149 939 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 KNOP1Q1ED39 458 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 HECTD3Q5T447 861 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 LPCAT2Q7L5N7 544 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 FAM35AQ86V20 835 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 BBS7Q8IWZ6 715 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 FUKQ8N0W3 1084 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 KCNV2Q8TDN2 545 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 PIGKQ92643 395 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 FBXO32Q969P5 355 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 CCSER2Q9H7U1 834 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 DMAC2Q9NW81 257 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 COMMD8Q9NX08 183 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 MYOFQ9NZM1 2061 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 MAN1B1Q9UKM7 699 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 STARD13Q9Y3M8 1113 aa11.35□□□□□ -0.59
HNRNPC-230ENST00000557201 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 LRRIQ3A6PVS8 624 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 TULP3O75386 442 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 BEST1O76090 585 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 BMP6P22004 513 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 IFRD2Q12894 506 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 TRPC3Q13507 836 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 TRIM61Q5EBN2 209 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 CCDC183Q5T5S1 534 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 SLC23A3Q6PIS1 610 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 TMEM25Q86YD3 366 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 SYT12Q8IV01 421 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 TMEFF1Q8IYR6 380 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 KDF1Q8NAX2 398 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 GOLGA5Q8TBA6 731 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 PARD3BQ8TEW8 1205 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 HMGB4Q8WW32 186 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 ELMO3Q96BJ8 720 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 SMOQ99835 787 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 CSNK1G1Q9HCP0 422 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 POLMQ9NP87 494 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 DMAP1Q9NPF5 467 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 SPHK2Q9NRA0 654 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 GMIPQ9P107 970 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 PILRBQ9UKJ0 227 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 SPEGQ15772 3267 aa11.34□□□□□ -0.59
HNRNPC-230ENST00000557201 A0A1W2PQF6 199 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 TCRBV21S2A2A0A5A6 115 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 UPK3BL1B0FP48 263 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 UPK3BL2E5RIL1 263 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 PDXKO00764 312 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 TRIM24O15164 1050 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 GABRG2P18507 467 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 HOXD12P35452 270 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 PPP1R2P41236 205 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 AP3M2P53677 418 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 LMAN2Q12907 356 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 PDAP1Q13442 181 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 NCOA4Q13772 614 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 NFKBIBQ15653 356 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 ZNF699Q32M78 642 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 UNQ6494/PRO21346Q6UXR6 183 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 HTR3DQ70Z44 454 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 PIP4P1Q86T03 277 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 ACOT1Q86TX2 421 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 TTC30AQ86WT1 665 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 MIB1Q86YT6 1006 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 SLC9A9Q8IVB4 645 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 CRYBG2Q8N1P7 616 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 NAT16Q8N8M0 369 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 TERB1Q8NA31 727 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 GATA6Q92908 595 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 SMARCD1Q96GM5 515 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 TNIP3Q96KP6 325 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 SPACA7Q96KW9 195 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 KLF16Q9BXK1 252 aaPredicted RBP11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 KCTD10Q9H3F6 313 aa11.33□□□□□ -0.6
HNRNPC-230ENST00000557201 CHD6Q8TD26 2715 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 ATP8B3O60423 1300 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 TBC1D3BA6NDS4 549 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 EXOC3O60645 756 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 AP1G2O75843 785 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 ENGP17813 658 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 SPINK2P20155 84 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 ITPKAP23677 461 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms