RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 PJA1Q8NG27 643 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 RIN3Q8TB24 985 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 SLC2A14Q8TDB8 520 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 BPIFB1Q8TDL5 484 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 MSANTD3Q96H12 275 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 SLC22A12Q96S37 553 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 KCNK16Q96T55 309 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 SRRTQ9BXP5 876 aaKnown RBP10.05□□□□□ -0.8
MARK3-211ENST00000556744 UBXN6Q9BZV1 441 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 BRD9Q9H8M2 597 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 DMAP1Q9NPF5 467 aaPredicted RBP10.05□□□□□ -0.8
MARK3-211ENST00000556744 CISHQ9NSE2 258 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 ARHGAP26Q9UNA1 814 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 MAGED2Q9UNF1 606 aaPredicted RBP10.05□□□□□ -0.8
MARK3-211ENST00000556744 ZNF232Q9UNY5 417 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 CCL26Q9Y258 94 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 SIT1Q9Y3P8 196 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 USP3Q9Y6I4 520 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 TICRRQ7Z2Z1 1910 aa10.05□□□□□ -0.8
MARK3-211ENST00000556744 ZFHX2Q9C0A1 2572 aaPredicted RBP10.04□□□□□ -0.8
MARK3-211ENST00000556744 MIA3Q5JRA6 1907 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 RIF1Q5UIP0 2472 aaKnown RBP10.04□□□□□ -0.8
MARK3-211ENST00000556744 COL4A3Q01955 1670 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 MAN2B1O00754 1011 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 SPINT1O43278 529 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 BEST1O76090 585 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 FGFR1OPO95684 399 aaKnown RBP10.04□□□□□ -0.8
MARK3-211ENST00000556744 OAS1P00973 400 aaKnown RBP10.04□□□□□ -0.8
MARK3-211ENST00000556744 CCDC130P13994 396 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 YWHAQP27348 245 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 ERCC5P28715 1186 aaPredicted RBP10.04□□□□□ -0.8
MARK3-211ENST00000556744 AVPR1AP37288 418 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 PLA2G5P39877 138 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 MAGEA9P43362 315 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 RPS9P46781 194 aaKnown RBP10.04□□□□□ -0.8
MARK3-211ENST00000556744 RNF144AP50876 292 aaPredicted RBP10.04□□□□□ -0.8
MARK3-211ENST00000556744 PDE6CP51160 858 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 RAD23BP54727 409 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 SLC7A9P82251 487 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 TAF10Q12962 218 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 CUL2Q13617 745 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 ZNF77Q15935 545 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 DCAF17Q5H9S7 520 aaPredicted RBP10.04□□□□□ -0.8
MARK3-211ENST00000556744 WDR44Q5JSH3 913 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 TCERG1LQ5VWI1 586 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 ARHGAP17Q68EM7 881 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 ZNF852Q6ZMS4 543 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 ZNF276Q8N554 614 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 DTWD2Q8NBA8 298 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 SLC4A11Q8NBS3 891 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 PDZD8Q8NEN9 1154 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 RHBDD1Q8TEB9 315 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 CYFIP2Q96F07 1278 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 MYO19Q96H55 970 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 CYP2S1Q96SQ9 504 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 DUSP16Q9BY84 665 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 IRF2BPLQ9H1B7 796 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 C8orf33Q9H7E9 229 aaPredicted RBP10.04□□□□□ -0.8
MARK3-211ENST00000556744 MMRN2Q9H8L6 949 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 LTB4R2Q9NPC1 389 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 HEBP1Q9NRV9 189 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 TRPM5Q9NZQ8 1165 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 CTNND2Q9UQB3 1225 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 MYH10P35580 1976 aa10.04□□□□□ -0.8
MARK3-211ENST00000556744 HELZP42694 1942 aaKnown RBP10.03□□□□□ -0.8
MARK3-211ENST00000556744 VPS13AQ96RL7 3174 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 TRAV19A0A0A6YYK7 116 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 C2orf78A6NCI8 922 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 USP17L7P0C7H9 530 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 DMDP11532 3685 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 HDCP19113 662 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 TRIM21P19474 475 aaKnown RBP10.03□□□□□ -0.8
MARK3-211ENST00000556744 ACO1P21399 889 aaKnown RBP10.03□□□□□ -0.8
MARK3-211ENST00000556744 TBXAS1P24557 533 aaPredicted RBP10.03□□□□□ -0.8
MARK3-211ENST00000556744 TUBP50607 506 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 SLC5A3P53794 718 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 STX17P56962 302 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 ZXDBP98169 803 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 NHLH1Q02575 133 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 ORC1Q13415 861 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 CLEC20AQ6ZU45 233 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 TPRG1Q6ZUI0 275 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 RALGPS2Q86X27 583 aaPredicted RBP10.03□□□□□ -0.8
MARK3-211ENST00000556744 LINC00528Q8N1L1 170 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 SCAMP5Q8TAC9 235 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 GPT2Q8TD30 523 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 JAKMIP2Q96AA8 810 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 TMEM176AQ96HP8 235 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 GBP4Q96PP9 640 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 SLITRK1Q96PX8 696 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 FOXQ1Q9C009 403 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 GRIP2Q9C0E4 1043 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 DNAI2Q9GZS0 605 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 RNF38Q9H0F5 515 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 SMG9Q9H0W8 520 aaKnown RBP10.03□□□□□ -0.8
MARK3-211ENST00000556744 NUP62CLQ9H1M0 184 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 HPS4Q9NQG7 708 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 GKN1Q9NS71 199 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 KRT82Q9NSB4 513 aa10.03□□□□□ -0.8
MARK3-211ENST00000556744 THG1LQ9NWX6 298 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms