RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 TFAP2BQ92481 460 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 OTUB2Q96DC9 234 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 CNOT6LQ96LI5 555 aaKnown RBP10.87□□□□□ -0.67
SHMT2-224ENST00000556737 KREMEN1Q96MU8 473 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 SRRTQ9BXP5 876 aaKnown RBP10.87□□□□□ -0.67
SHMT2-224ENST00000556737 UBXN6Q9BZV1 441 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 DNAI2Q9GZS0 605 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 INTS2Q9H0H0 1204 aaKnown RBP10.87□□□□□ -0.67
SHMT2-224ENST00000556737 CLIC5Q9NZA1 410 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 NUDT5Q9UKK9 219 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 MYOFQ9NZM1 2061 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 K7EQS6 105 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 RNF225M0QZC1 329 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-224ENST00000556737 HOXC11O43248 304 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-224ENST00000556737 GABBR2O75899 941 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 ADH1CP00326 375 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 CALCAP01258 141 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 PAEPP09466 180 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 CD19P15391 556 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 PLA2G4AP47712 749 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 SLC6A11P48066 632 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 TKTL1P51854 596 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 NRLP54845 237 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 GCNT1Q02742 428 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 BST2Q10589 180 aaKnown RBP10.86□□□□□ -0.67
SHMT2-224ENST00000556737 NR1H3Q13133 447 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 SRSF5Q13243 272 aaKnown RBP10.86□□□□□ -0.67
SHMT2-224ENST00000556737 DPCR1Q3MIW9 517 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 SGO2Q562F6 1265 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 LY6G5CQ5SRR4 150 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 PM20D1Q6GTS8 502 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 TMEM270Q6UE05 265 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 Q6ZNB5 142 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 HTR3DQ70Z44 454 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 WDR5BQ86VZ2 330 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 RBBP8NLQ8NC74 664 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-224ENST00000556737 RPLP0P6Q8NHW5 317 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 ATRIPQ8WXE1 791 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 P2RY11Q96G91 374 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 ULBP1Q9BZM6 244 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 NACA2Q9H009 215 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 TBC1D14Q9P2M4 693 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 NAGPAQ9UK23 515 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.86□□□□□ -0.67
SHMT2-224ENST00000556737 SH3BP1Q9Y3L3 701 aa10.86□□□□□ -0.67
SHMT2-224ENST00000556737 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.86□□□□□ -0.67
SHMT2-224ENST00000556737 ATG2BQ96BY7 2078 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 HRO43593 1189 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 STC2O76061 302 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 SETSIPP0DME0 302 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 CCDC192P0DO97 292 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 VDRP11473 427 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 BRD2P25440 801 aaKnown RBP10.85□□□□□ -0.67
SHMT2-224ENST00000556737 ATP5C1P36542 298 aaKnown RBP10.85□□□□□ -0.67
SHMT2-224ENST00000556737 PSEN1P49768 467 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 KDSRQ06136 332 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 C10orf120Q5SQS8 335 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 HEATR6Q6AI08 1181 aaKnown RBP10.85□□□□□ -0.67
SHMT2-224ENST00000556737 LCLAT1Q6UWP7 414 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 RRAGAQ7L523 313 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 SYT13Q7L8C5 426 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 LONP2Q86WA8 852 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 DCLK2Q8N568 766 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 MLKLQ8NB16 471 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 EHBP1Q8NDI1 1231 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 UBA3Q8TBC4 463 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 USP33Q8TEY7 942 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 NDRG1Q92597 394 aaKnown RBP10.85□□□□□ -0.67
SHMT2-224ENST00000556737 EXOC4Q96A65 974 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 TSPY26PQ9H489 355 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 CNTN6Q9UQ52 1028 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 PCDHB4Q9Y5E5 795 aa10.85□□□□□ -0.67
SHMT2-224ENST00000556737 EP300Q09472 2414 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-224ENST00000556737 ZBED1O96006 694 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 KIR2DL1P43626 348 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-224ENST00000556737 PXNP49023 591 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-224ENST00000556737 YWHAGP61981 247 aaKnown RBP eCLIP10.84□□□□□ -0.67
SHMT2-224ENST00000556737 APBA1Q02410 837 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 GAD2Q05329 585 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 ADIGQ0VDE8 80 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 CETN1Q12798 172 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 TRIM65Q6PJ69 517 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 LRSAM1Q6UWE0 723 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 TMEM25Q86YD3 366 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 MIB1Q86YT6 1006 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 SCML4Q8N228 414 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 KCTD13Q8WZ19 329 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 RUBCNQ92622 972 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 ACDQ96AP0 544 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 HHIPQ96QV1 700 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 SPHK2Q9NRA0 654 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 MARK1Q9P0L2 795 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 HESX1Q9UBX0 185 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 RASAL2Q9UJF2 1139 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 DNMT3LQ9UJW3 386 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 KIAA1257Q9ULG3 409 aa10.84□□□□□ -0.67
SHMT2-224ENST00000556737 MUC22E2RYF6 1773 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-224ENST00000556737 A0A0A0MRY4 1105 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 CCDC163A0A0D9SF12 145 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 YJEFN3A6XGL0 299 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms