RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 PSMC5P62195 406 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 RNF4P78317 190 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 GTF2BQ00403 316 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 TAP1Q03518 808 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 ZP2Q05996 745 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 CACNB2Q08289 660 aaPredicted RBP6.47□□□□□ -1.37
CPSF2-205ENST00000556622 MAPK7Q13164 816 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 DMP1Q13316 513 aaPredicted RBP6.47□□□□□ -1.37
CPSF2-205ENST00000556622 IKZF1Q13422 519 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 PRPF4BQ13523 1007 aaKnown RBP6.47□□□□□ -1.37
CPSF2-205ENST00000556622 ITIH4Q14624 930 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 CCL14Q16627 93 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 KRT71Q3SY84 523 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 USH1GQ495M9 461 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 BRDTQ58F21 947 aaPredicted RBP6.47□□□□□ -1.37
CPSF2-205ENST00000556622 SNRNP48Q6IEG0 339 aaKnown RBP6.47□□□□□ -1.37
CPSF2-205ENST00000556622 TMC3Q7Z5M5 1100 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 TMEM192Q8IY95 271 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 ABRAQ8N0Z2 381 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 ANKRD35Q8N283 1001 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 RIBC1Q8N443 379 aaPredicted RBP6.47□□□□□ -1.37
CPSF2-205ENST00000556622 CCDC89Q8N998 374 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 NPLOC4Q8TAT6 608 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 MAGEC3Q8TD91 643 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 ZNF473Q8WTR7 871 aaKnown RBP6.47□□□□□ -1.37
CPSF2-205ENST00000556622 HDAC7Q8WUI4 952 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 LENG9Q96B70 501 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 CHMP6Q96FZ7 201 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 DYDC2Q96IM9 177 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 MS4A14Q96JA4 679 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 NT5C1BQ96P26 610 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 DEFB118Q96PH6 123 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 PSMB7Q99436 277 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 MPHOSPH6Q99547 160 aaKnown RBP6.47□□□□□ -1.37
CPSF2-205ENST00000556622 APBA2Q99767 749 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 TEX13BQ9BXU2 312 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 FRMD8P1Q9BZ68 369 aaPredicted RBP6.47□□□□□ -1.37
CPSF2-205ENST00000556622 YY1AP1Q9H869 796 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 KCNK12Q9HB15 430 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 SLC38A10Q9HBR0 1119 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 TMEM8AQ9HCN3 771 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 A1CFQ9NQ94 594 aaKnown RBP6.47□□□□□ -1.37
CPSF2-205ENST00000556622 GPATCH2Q9NW75 528 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 SENP1Q9P0U3 644 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 BCCIPQ9P287 314 aaKnown RBP eCLIP6.47□□□□□ -1.37
CPSF2-205ENST00000556622 GTF3C4Q9UKN8 822 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 NENFQ9UMX5 172 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 SCINQ9Y6U3 715 aa6.47□□□□□ -1.37
CPSF2-205ENST00000556622 DDX3XO00571 662 aaKnown RBP eCLIP6.46□□□□□ -1.38
CPSF2-205ENST00000556622 CHUKO15111 745 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 TGFB1I1O43294 461 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 EDIL3O43854 480 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 BUB1BO60566 1050 aaPredicted RBP6.46□□□□□ -1.38
CPSF2-205ENST00000556622 ATP5HO75947 161 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 FTLP02792 175 aaPredicted RBP6.46□□□□□ -1.38
CPSF2-205ENST00000556622 PGK2P07205 417 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 MYBL2P10244 700 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 ALAS1P13196 640 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 EZRP15311 586 aaKnown RBP6.46□□□□□ -1.38
CPSF2-205ENST00000556622 DESP17661 470 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 HOXA5P20719 270 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 TBXAS1P24557 533 aaPredicted RBP6.46□□□□□ -1.38
CPSF2-205ENST00000556622 GIPRP48546 466 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 HSD17B4P51659 736 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 MNAT1P51948 309 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 OAZ1P54368 228 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 GCNT1Q02742 428 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 CYP4A11Q02928 519 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 PTP4A2Q12974 167 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 MTMR1Q13613 665 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 GRB14Q14449 540 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 PPP1R7Q15435 360 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 SURF1Q15526 300 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 CYP1B1Q16678 543 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 TKFCQ3LXA3 575 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 GNPTABQ3T906 1256 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 RNF187Q5TA31 235 aaPredicted RBP6.46□□□□□ -1.38
CPSF2-205ENST00000556622 NAA35Q5VZE5 725 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 DUPD1Q68J44 220 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 PPP1R21Q6ZMI0 780 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 ARHGEF18Q6ZSZ5 1173 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 CCDC105Q8IYK2 499 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 CCDC197Q8NCU1 140 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 FBXL13Q8NEE6 735 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 CHST13Q8NET6 341 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 REPS2Q8NFH8 660 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 MYCBPAPQ8TBZ2 947 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 TRIB2Q92519 343 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 KCNN1Q92952 543 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 MAGOHBQ96A72 148 aaKnown RBP6.46□□□□□ -1.38
CPSF2-205ENST00000556622 FAXDC2Q96IV6 333 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 CCDC114Q96M63 670 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 GDAP1L1Q96MZ0 367 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 TTC25Q96NG3 672 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 SERPINB12Q96P63 405 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 SENP7Q9BQF6 1050 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 ZSWIM1Q9BR11 485 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 LXNQ9BS40 222 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 NTPCRQ9BSD7 190 aaKnown RBP6.46□□□□□ -1.38
CPSF2-205ENST00000556622 STRA6Q9BX79 667 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms