RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 UBA5Q9GZZ9 404 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 RAB17Q9H0T7 212 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 METTL14Q9HCE5 456 aaKnown RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 NLRC4Q9NPP4 1024 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 PLCB1Q9NQ66 1216 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 TMEM260Q9NX78 707 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 MTMR10Q9NXD2 777 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 GGA3Q9NZ52 723 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 ARMCX3Q9UH62 379 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 CNOT7Q9UIV1 285 aaKnown RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 RASAL2Q9UJF2 1139 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 PCDHA12Q9UN75 941 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 TFR2Q9UP52 801 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 DAAM1Q9Y4D1 1078 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 SLC30A1Q9Y6M5 507 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 ATAD5Q96QE3 1844 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 GAKO14976 1311 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 UBE4BO95155 1302 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 RPTORQ8N122 1335 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 GPR75-ASB3A0A0A6YYF3 556 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 BTNL10A8MVZ5 291 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 GCOM1H8Y6P7 765 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 ZBTB5O15062 677 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 NKRFO15226 690 aaKnown RBP eCLIP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 SLC16A3O15427 465 aaKnown RBP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 NCK2O43639 380 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 SLC37A4O43826 429 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 ZEB2O60315 1214 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 MAFO75444 373 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 RAD17O75943 681 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 PRPF6O94906 941 aaKnown RBP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 FTCDO95954 541 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 IL18BPO95998 194 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 TFRCP02786 760 aaKnown RBP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 PLEKP08567 350 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 MYZAPP0CAP1 466 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 FERP16591 822 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 GAP43P17677 238 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 NR2F2P24468 414 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 DNAJA1P31689 397 aaKnown RBP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 CXCR5P32302 372 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 RDXP35241 583 aaKnown RBP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 ETV4P43268 484 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 GTF2A1P52655 376 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 HMGA2P52926 109 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 ZNF543Q08ER8 600 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 IFFO1Q0D2I5 559 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 BIRC3Q13489 604 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 TNIP1Q15025 636 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 NAB2Q15742 525 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 GPR19Q15760 415 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 UBE2SQ16763 222 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 KIAA0753Q2KHM9 967 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 FAM83BQ5T0W9 1011 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 KLHDC7AQ5VTJ3 777 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 LRIG3Q6UXM1 1119 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 KDM7AQ6ZMT4 941 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 LRRC55Q6ZSA7 311 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 C16orf59Q7L2K0 433 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 ARMC9Q7Z3E5 817 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 MREGQ8N565 214 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 OTUD6BQ8N6M0 293 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 FAM133AQ8N9E0 248 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 EIF1ADQ8N9N8 165 aaKnown RBP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 CD99L2Q8TCZ2 262 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 TBC1D5Q92609 795 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 HPS3Q969F9 1004 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 COA7Q96BR5 231 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 EEF2KMTQ96G04 330 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 SNX27Q96L92 541 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 CCDC17Q96LX7 622 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 ZIM3Q96PE6 472 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 MTMR9Q96QG7 549 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 KRT12Q99456 494 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 LRRC1Q9BTT6 524 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 MMTAG2Q9BU76 263 aaKnown RBP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 SPATA9Q9BWV2 254 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 ANO3Q9BYT9 981 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 CCDC113Q9H0I3 377 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 STMN4Q9H169 189 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 VPS33BQ9H267 617 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 CENPHQ9H3R5 247 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 RIOX1Q9H6W3 641 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 PSTPIP2Q9H939 334 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 EPB41L5Q9HCM4 733 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 CD209Q9NNX6 404 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 RBM12Q9NTZ6 932 aaKnown RBP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 BLOC1S4Q9NUP1 217 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 PPARGC1AQ9UBK2 798 aaKnown RBP4.72□□□□□ -1.65
ATXN3-241ENST00000556374 SERPINB13Q9UIV8 391 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 TELO2Q9Y4R8 837 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 LOXHD1Q8IVV2 1947 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 MYH4Q9Y623 1939 aa4.72□□□□□ -1.65
ATXN3-241ENST00000556374 MUC3AQ02505 3323 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 PIEZO1Q92508 2521 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 SRRM3A6NNA2 597 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 YDJCA8MPS7 323 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 ACOT7O00154 380 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 KCNK3O14649 394 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 ADAMTS3O15072 1205 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms