RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 SCN10AQ9Y5Y9 1956 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 GBF1Q92538 1859 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 UNC80Q8N2C7 3258 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 ZMYM6O95789 1325 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 C17orf102A2RUQ5 167 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 CCDC69A6NI79 296 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 RSPH10B2B2RC85 870 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 DYNC1I1O14576 645 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 BAIAP3O94812 1187 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 ABHD16AO95870 558 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 RSPH10BP0C881 870 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 ZNF286BP0CG31 522 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 TGFB3P10600 412 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 CKBP12277 381 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 ATP2B1P20020 1258 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 PDCP20941 246 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 PSMA5P28066 241 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 KIF5BP33176 963 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 FNTBP49356 437 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 GNAQP50148 359 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 NPEPPSP55786 919 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 UBE2HP62256 183 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 TAP1Q03518 808 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 ARHGAP1Q07960 439 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 NEDD9Q14511 834 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 ANKRD1Q15327 319 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 TTC38Q5R3I4 469 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 CELF3Q5SZQ8 465 aaKnown RBP4.42□□□□□ -1.7
ATXN3-240ENST00000556339 CCDC183Q5T5S1 534 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 PCSK4Q6UW60 755 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 CYB5R4Q7L1T6 521 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 LRRC8DQ7L1W4 858 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 BRAPQ7Z569 592 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 MRGPREQ86SM8 312 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 RSPH3Q86UC2 560 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 RTN4RL1Q86UN2 441 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-240ENST00000556339 MYOCDQ8IZQ8 938 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 PPTC7Q8NI37 304 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 SLC7A14Q8TBB6 771 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 SEPT8Q92599 483 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 TGS1Q96RS0 853 aaKnown RBP4.42□□□□□ -1.7
ATXN3-240ENST00000556339 TUBGCP5Q96RT8 1024 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 TSPY26PQ9H489 355 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 RIOX1Q9H6W3 641 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 KCMF1Q9P0J7 381 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 COL20A1Q9P218 1284 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 USP25Q9UHP3 1055 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 MAD2L2Q9UI95 211 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 MTUS1Q9ULD2 1270 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 NAP1L2Q9ULW6 460 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-240ENST00000556339 COG5Q9UP83 839 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 LIMCH1Q9UPQ0 1083 aa4.42□□□□□ -1.7
ATXN3-240ENST00000556339 E7EWF7 191 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 MAFGO15525 162 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 PRC1O43663 620 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 RECQL4O94761 1208 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 JUNP05412 331 aaKnown RBP4.41□□□□□ -1.7
ATXN3-240ENST00000556339 VSIG10L2P0DP72 767 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 IBSPP21815 317 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-240ENST00000556339 HSD17B4P51659 736 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 WDR5P61964 334 aaKnown RBP4.41□□□□□ -1.7
ATXN3-240ENST00000556339 MRPS21P82921 87 aaKnown RBP4.41□□□□□ -1.7
ATXN3-240ENST00000556339 TFF2Q03403 129 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 GRM4Q14833 912 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 PGM5Q15124 567 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 ZNF174Q15697 407 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 ARHGAP44Q17R89 818 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 ZNF618Q5T7W0 954 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 MBNL2Q5VZF2 373 aaKnown RBP4.41□□□□□ -1.7
ATXN3-240ENST00000556339 Q6ZPA2 131 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 STOX1Q6ZVD7 989 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 TMCO2Q7Z6W1 182 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-240ENST00000556339 DDX53Q86TM3 631 aaKnown RBP4.41□□□□□ -1.7
ATXN3-240ENST00000556339 SESTD1Q86VW0 696 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 GSTCDQ8NEC7 633 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 GPT2Q8TD30 523 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 KAT2BQ92831 832 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 GLG1Q92896 1179 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 FOXRED1Q96CU9 486 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-240ENST00000556339 ZNF512Q96ME7 567 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-240ENST00000556339 YME1L1Q96TA2 773 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 LZTS2Q9BRK4 669 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 PDCD2LQ9BRP1 358 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 PSTPIP2Q9H939 334 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 ACSS2Q9NR19 701 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 SETD4Q9NVD3 440 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 ZNF215Q9UL58 517 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-240ENST00000556339 SORCS3Q9UPU3 1222 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 INSL6Q9Y581 213 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 MTCH2Q9Y6C9 303 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 EVPLQ92817 2033 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 EMSYQ7Z589 1322 aa4.41□□□□□ -1.7
ATXN3-240ENST00000556339 LCTP09848 1927 aa4.4□□□□□ -1.7
ATXN3-240ENST00000556339 SPTBN5Q9NRC6 3674 aaKnown RBP4.4□□□□□ -1.7
ATXN3-240ENST00000556339 CHD7Q9P2D1 2997 aa4.4□□□□□ -1.7
ATXN3-240ENST00000556339 TCRBV16S1A1N1A0A5B0 115 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 M0QZ92 97 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 FIBPO43427 364 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 STX6O43752 255 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 NBNO60934 754 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms