RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 PARD3BQ8TEW8 1205 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 CD101Q93033 1021 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 C8orf48Q96LL4 319 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 SLITRK1Q96PX8 696 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 HHIPQ96QV1 700 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 C1QTNF2Q9BXJ5 285 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 B3GNT5Q9BYG0 378 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 RNF38Q9H0F5 515 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 XYLT2Q9H1B5 865 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 TMEM30AQ9NV96 361 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 ARHGAP26Q9UNA1 814 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 FRMD4BQ9Y2L6 1034 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 DSPP15924 2871 aaKnown RBP7.1□□□□□ -1.27
PSEN1-216ENST00000556066 DCDC2BA2VCK2 349 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 PDXKO00764 312 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 RTN3O95197 1032 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-216ENST00000556066 VNN1O95497 513 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 NFATC1O95644 943 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 STAU1O95793 577 aaKnown RBP7.1□□□□□ -1.27
PSEN1-216ENST00000556066 C4BPAP04003 597 aaKnown RBP7.1□□□□□ -1.27
PSEN1-216ENST00000556066 RPN1P04843 607 aaKnown RBP7.1□□□□□ -1.27
PSEN1-216ENST00000556066 FAM163BP0C2L3 166 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 MBL2P11226 248 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-216ENST00000556066 P4HA1P13674 534 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 CCDC130P13994 396 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 CMA1P23946 247 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 VARSP26640 1264 aaKnown RBP7.1□□□□□ -1.27
PSEN1-216ENST00000556066 YWHAQP27348 245 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 HOXA6P31267 233 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 GMPRP36959 345 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 PIK3CAP42336 1068 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 SYKP43405 635 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 PPP3CCP48454 512 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 NDUFA8P51970 172 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 AP3M2P53677 418 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 SEC13P55735 322 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 ZXDBP98169 803 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 ORC1Q13415 861 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 CCDC6Q16204 474 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 FBXO43Q4G163 708 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 C2orf27AQ580R0 203 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 SND1Q7KZF4 910 aaKnown RBP eCLIP7.1□□□□□ -1.27
PSEN1-216ENST00000556066 FILIP1Q7Z7B0 1213 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 ACOT1Q86TX2 421 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 FAM35AQ86V20 835 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 KBTBD6Q86V97 674 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 TTC30AQ86WT1 665 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 NUP93Q8N1F7 819 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 SCAMP5Q8TAC9 235 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 GAB3Q8WWW8 586 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 HPS1Q92902 700 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 FBXO32Q969P5 355 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 CCDC47Q96A33 483 aaKnown RBP7.1□□□□□ -1.27
PSEN1-216ENST00000556066 TNIP3Q96KP6 325 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 CEP295NLQ96MC4 621 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 KCNK16Q96T55 309 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 TTLL2Q9BWV7 592 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 NACA2Q9H009 215 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 SDCBP2Q9H190 292 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 ARRDC1-AS1Q9H2J1 176 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 KCTD10Q9H3F6 313 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 MMRN2Q9H8L6 949 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 DMAP1Q9NPF5 467 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-216ENST00000556066 KRT82Q9NSB4 513 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 SEMA4GQ9NTN9 838 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 CFAP97Q9P2B7 532 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 CHORDC1Q9UHD1 332 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-216ENST00000556066 USP25Q9UHP3 1055 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 MAPK8IP1Q9UQF2 711 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 CPQQ9Y646 472 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 GON4LQ3T8J9 2241 aa7.1□□□□□ -1.27
PSEN1-216ENST00000556066 CEP192Q8TEP8 1941 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 SLC9A3R1O14745 358 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-216ENST00000556066 CALUO43852 315 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-216ENST00000556066 LRP3O75074 770 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 KIF20AO95235 890 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 APBB3O95704 486 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 OAS1P00973 400 aaKnown RBP7.09□□□□□ -1.27
PSEN1-216ENST00000556066 CYP17A1P05093 508 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 IRF1P10914 325 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 PFKLP17858 780 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 VAMP7P51809 220 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 DGKEP52429 567 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 NDST1P52848 882 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 SLC5A3P53794 718 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 CLDN10P78369 228 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 SLC7A9P82251 487 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 DMC1Q14565 340 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 CSRP2Q16527 193 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 ST3GAL2Q16842 350 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 SGSM1Q2NKQ1 1148 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 SPOPLQ6IQ16 392 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 PRR23CQ6ZRP0 262 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 SV2AQ7L0J3 742 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 SYT13Q7L8C5 426 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 CACNA2D4Q7Z3S7 1137 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 SLC9A9Q8IVB4 645 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 FUKQ8N0W3 1084 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 CCDC33Q8N5R6 958 aa7.09□□□□□ -1.27
PSEN1-216ENST00000556066 CAMKK1Q8N5S9 505 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms