RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 OTUD7AQ8TE49 926 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-215ENST00000556011 GPRASP2Q96D09 838 aa8.16□□□□□ -1.1
PSEN1-215ENST00000556011 SIPA1Q96FS4 1042 aa8.16□□□□□ -1.1
PSEN1-215ENST00000556011 P2RY11Q96G91 374 aa8.16□□□□□ -1.1
PSEN1-215ENST00000556011 TMEM47Q9BQJ4 181 aa8.16□□□□□ -1.1
PSEN1-215ENST00000556011 SYNDIG1Q9H7V2 258 aa8.16□□□□□ -1.1
PSEN1-215ENST00000556011 AASDHPPTQ9NRN7 309 aa8.16□□□□□ -1.1
PSEN1-215ENST00000556011 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.16□□□□□ -1.1
PSEN1-215ENST00000556011 LOXL2Q9Y4K0 774 aa8.16□□□□□ -1.1
PSEN1-215ENST00000556011 TLR4O00206 839 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 SRGAP3O43295 1099 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 IGHV4-34P06331 123 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 BRCC3P46736 316 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 NOVP48745 357 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 DGKQP52824 942 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 DUSP4Q13115 394 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 DRAP1Q14919 205 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-215ENST00000556011 CD300LGQ6UXG3 332 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 CRELD2Q6UXH1 353 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-215ENST00000556011 RD3Q7Z3Z2 195 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 TMPRSS6Q8IU80 811 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 KRTAP1-3Q8IUG1 177 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 CCDC60Q8IWA6 550 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-215ENST00000556011 CKAP2LQ8IYA6 745 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 CACNA2D3Q8IZS8 1091 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 ACRBPQ8NEB7 543 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 TPCN2Q8NHX9 752 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 PGLYRP2Q96PD5 576 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 INO80BQ9C086 356 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-215ENST00000556011 CDH19Q9H159 772 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 CAAP1Q9H8G2 361 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 USP29Q9HBJ7 922 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 LRTM1Q9HBL6 345 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 VAT1LQ9HCJ6 419 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 SERGEFQ9UGK8 458 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 MAFFQ9ULX9 164 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 SLC27A5Q9Y2P5 690 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 ASB3Q9Y575 518 aa8.15□□□□□ -1.1
PSEN1-215ENST00000556011 TSPY2A6NKD2 308 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 DDX11L8A8MPP1 907 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 GSG1L2A8MUP6 293 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 SEMA4FO95754 770 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 STSP08842 583 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 ACADMP11310 421 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 TCN2P20062 427 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 DGKAP23743 735 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 FOXM1Q08050 763 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 SPIDRQ14159 915 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 DHCR24Q15392 516 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 PERM1Q5SV97 790 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 FAM160B1Q5W0V3 765 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 TMEM150AQ86TG1 271 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 PRCCQ92733 491 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-215ENST00000556011 MTFMTQ96DP5 389 aaKnown RBP8.14□□□□□ -1.11
PSEN1-215ENST00000556011 CDHR1Q96JP9 859 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 STRADBQ9C0K7 418 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 ENKD1Q9H0I2 346 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 NXF3Q9H4D5 531 aaKnown RBP8.14□□□□□ -1.11
PSEN1-215ENST00000556011 EBF2Q9HAK2 575 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 ZMYM5Q9UJ78 669 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 TIMM13Q9Y5L4 95 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-215ENST00000556011 DNAH1Q9P2D7 4330 aa8.14□□□□□ -1.11
PSEN1-215ENST00000556011 USF3Q68DE3 2245 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 K7ELQ4 463 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-215ENST00000556011 TRIM24O15164 1050 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 LRCH4O75427 683 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 SNHG28P0DPA3 235 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 TOP1P11387 765 aaKnown RBP8.13□□□□□ -1.11
PSEN1-215ENST00000556011 CPB1P15086 417 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 UGT1A3P35503 534 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 FAM160A1Q05DH4 1040 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 TTF1Q15361 905 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-215ENST00000556011 CTXN3Q4LDR2 81 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 ATF7IP2Q5U623 682 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 LINGO4Q6UY18 593 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 IFNLR1Q8IU57 520 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-215ENST00000556011 IQCKQ8N0W5 287 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 PNPLA2Q96AD5 504 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 SCARF2Q96GP6 870 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-215ENST00000556011 CCDC120Q96HB5 630 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 CYP2S1Q96SQ9 504 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 SECISBP2Q96T21 854 aaKnown RBP8.13□□□□□ -1.11
PSEN1-215ENST00000556011 GPN2Q9H9Y4 310 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-215ENST00000556011 ZNF302Q9NR11 478 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 NTNG1Q9Y2I2 539 aa8.13□□□□□ -1.11
PSEN1-215ENST00000556011 A0A1W2PPC4 97 aa8.12□□□□□ -1.11
PSEN1-215ENST00000556011 PPP1R11O60927 126 aaPredicted RBP8.12□□□□□ -1.11
PSEN1-215ENST00000556011 B3GAT3O94766 335 aa8.12□□□□□ -1.11
PSEN1-215ENST00000556011 PRR29P0C7W0 189 aa8.12□□□□□ -1.11
PSEN1-215ENST00000556011 ADD2P35612 726 aa8.12□□□□□ -1.11
PSEN1-215ENST00000556011 HARS2P49590 506 aaKnown RBP8.12□□□□□ -1.11
PSEN1-215ENST00000556011 ARSDP51689 593 aa8.12□□□□□ -1.11
PSEN1-215ENST00000556011 MTMR1Q13613 665 aa8.12□□□□□ -1.11
PSEN1-215ENST00000556011 DOC2BQ14184 412 aa8.12□□□□□ -1.11
PSEN1-215ENST00000556011 CDSNQ15517 529 aa8.12□□□□□ -1.11
PSEN1-215ENST00000556011 ZC2HC1CQ53FD0 456 aaPredicted RBP8.12□□□□□ -1.11
PSEN1-215ENST00000556011 UBAP2Q5T6F2 1119 aaKnown RBP8.12□□□□□ -1.11
PSEN1-215ENST00000556011 UNC5BQ8IZJ1 945 aa8.12□□□□□ -1.11
PSEN1-215ENST00000556011 SAMD3Q8N6K7 520 aa8.12□□□□□ -1.11
PSEN1-215ENST00000556011 NAT16Q8N8M0 369 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms