RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 PRAMEF17Q5VTA0 474 aa5.72□□□□□ -1.49
ATXN3-234ENST00000555958 MTHFD1LQ6UB35 978 aa5.72□□□□□ -1.49
ATXN3-234ENST00000555958 KCTD20Q7Z5Y7 419 aa5.72□□□□□ -1.49
ATXN3-234ENST00000555958 WDR75Q8IWA0 830 aaKnown RBP5.72□□□□□ -1.49
ATXN3-234ENST00000555958 DNAJB14Q8TBM8 379 aa5.72□□□□□ -1.49
ATXN3-234ENST00000555958 LENG8Q96PV6 779 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-234ENST00000555958 TRIM5Q9C035 493 aa5.72□□□□□ -1.49
ATXN3-234ENST00000555958 OBP2AQ9NY56 170 aa5.72□□□□□ -1.49
ATXN3-234ENST00000555958 USP22Q9UPT9 525 aa5.72□□□□□ -1.49
ATXN3-234ENST00000555958 CDY1Q9Y6F8 540 aa5.72□□□□□ -1.49
ATXN3-234ENST00000555958 KDM5AP29375 1690 aaKnown RBP5.72□□□□□ -1.49
ATXN3-234ENST00000555958 SHPRHQ149N8 1683 aa5.72□□□□□ -1.49
ATXN3-234ENST00000555958 MAST1Q9Y2H9 1570 aa5.72□□□□□ -1.49
ATXN3-234ENST00000555958 EP400Q96L91 3159 aa5.71□□□□□ -1.49
ATXN3-234ENST00000555958 MBD3L4A6NDZ8 208 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-234ENST00000555958 MBD3L3A6NE82 208 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-234ENST00000555958 PRRT4C9JH25 899 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 H7C4K7 107 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 PSMD9O00233 223 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 PPM1GO15355 546 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-234ENST00000555958 MGEA5O60502 916 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 EXOC3O60645 756 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 LMO1P25800 156 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 BCAT1P54687 386 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 RPS16P62249 146 aaKnown RBP5.71□□□□□ -1.5
ATXN3-234ENST00000555958 TUBA4AP68366 448 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 IDI1Q13907 227 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 POLD3Q15054 466 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-234ENST00000555958 NPY5RQ15761 445 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 SRSF7Q16629 238 aaKnown RBP eCLIP5.71□□□□□ -1.5
ATXN3-234ENST00000555958 CACHD1Q5VU97 1274 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 CYP2W1Q8TAV3 490 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 RSPRY1Q96DX4 576 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 THAP7Q9BT49 309 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-234ENST00000555958 FLRT1Q9NZU1 646 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 COL20A1Q9P218 1284 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 HDAC9Q9UKV0 1011 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 MYO5BQ9ULV0 1848 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 DIP2AQ14689 1571 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-234ENST00000555958 LRRC9Q6ZRR7 1453 aa5.71□□□□□ -1.5
ATXN3-234ENST00000555958 DNAJC9-AS1A6NH13 148 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 TISP43B9A030 160 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 SRGAP2O75044 1071 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 ATF3P18847 181 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 KLRC1P26715 233 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 PEX2P28328 305 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 PTDSS1P48651 473 aaKnown RBP5.7□□□□□ -1.5
ATXN3-234ENST00000555958 ITGA8P53708 1063 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 FAM193AP78312 1265 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 E2F1Q01094 437 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 CYP1B1Q16678 543 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 TRIM72Q6ZMU5 477 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 DPY19L3Q6ZPD9 716 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 SESTD1Q86VW0 696 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 RAB11FIP4Q86YS3 637 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 FMNL3Q8IVF7 1028 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 SIRT6Q8N6T7 355 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 TERB1Q8NA31 727 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 DAZAP1Q96EP5 407 aaKnown RBP5.7□□□□□ -1.5
ATXN3-234ENST00000555958 ZBTB45Q96K62 511 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-234ENST00000555958 SLC29A3Q9BZD2 475 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 PRDM11Q9NQV5 511 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 DNMT3BQ9UBC3 853 aaKnown RBP5.7□□□□□ -1.5
ATXN3-234ENST00000555958 DRG1Q9Y295 367 aaKnown RBP5.7□□□□□ -1.5
ATXN3-234ENST00000555958 NWD1Q149M9 1564 aa5.7□□□□□ -1.5
ATXN3-234ENST00000555958 FNDC1Q4ZHG4 1894 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-234ENST00000555958 CHD2O14647 1828 aaKnown RBP5.69□□□□□ -1.5
ATXN3-234ENST00000555958 EFCAB6Q5THR3 1501 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 EHBP1L1Q8N3D4 1523 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 RAB27BO00194 218 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 TSPY4P0CV99 314 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 TSPY10P0CW01 314 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 CYP2D6P10635 497 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 UQCRC1P31930 480 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 ARHGEF7Q14155 803 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 SLC29A2Q14542 456 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 BRINP3Q76B58 766 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 CHSY1Q86X52 802 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 PNLDC1Q8NA58 520 aaKnown RBP5.69□□□□□ -1.5
ATXN3-234ENST00000555958 PRR25Q96S07 402 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 CIPCQ9C0C6 399 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 CHST8Q9H2A9 424 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 RRP7BPQ9NSQ0 103 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 TFCP2L1Q9NZI6 479 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 KLHL42Q9P2K6 505 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 ITGB1BP2Q9UKP3 347 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 AMFRQ9UKV5 643 aa5.69□□□□□ -1.5
ATXN3-234ENST00000555958 COL3A1P02461 1466 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-234ENST00000555958 AHDC1Q5TGY3 1603 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-234ENST00000555958 CES2O00748 559 aa5.68□□□□□ -1.5
ATXN3-234ENST00000555958 CCP110O43303 1012 aa5.68□□□□□ -1.5
ATXN3-234ENST00000555958 RRP9O43818 475 aaKnown RBP5.68□□□□□ -1.5
ATXN3-234ENST00000555958 PMPCBO75439 489 aa5.68□□□□□ -1.5
ATXN3-234ENST00000555958 LATS1O95835 1130 aa5.68□□□□□ -1.5
ATXN3-234ENST00000555958 MYCLP12524 364 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-234ENST00000555958 EPHA3P29320 983 aa5.68□□□□□ -1.5
ATXN3-234ENST00000555958 MPGP29372 298 aa5.68□□□□□ -1.5
ATXN3-234ENST00000555958 GKP32189 559 aa5.68□□□□□ -1.5
ATXN3-234ENST00000555958 FCRL6Q6DN72 434 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms