RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ASB7Q9H672 318 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 RAB6BQ9NRW1 208 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 ADARB2Q9NS39 739 aaKnown RBP7.28□□□□□ -1.24
TDP1-213ENST00000555880 SLC17A7Q9P2U7 560 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 SIX4Q9UIU6 781 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 BARX2Q9UMQ3 279 aaPredicted RBP7.28□□□□□ -1.24
TDP1-213ENST00000555880 APOL1O14791 398 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 PIAS1O75925 651 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 DDNO94850 711 aaPredicted RBP7.28□□□□□ -1.24
TDP1-213ENST00000555880 SNRPAP09012 282 aaKnown RBP7.28□□□□□ -1.24
TDP1-213ENST00000555880 GSTA2P09210 222 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 GPD2P43304 727 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 CLCN3P51790 818 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 NEK3P51956 506 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 HIRAP54198 1017 aaPredicted RBP7.28□□□□□ -1.24
TDP1-213ENST00000555880 BCAR1P56945 870 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 VGLL4Q14135 290 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 KCTD2Q14681 263 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 TAF5Q15542 800 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 CDO1Q16878 200 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 TSNAXIP1Q2TAA8 658 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 LRRC6Q86X45 466 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 ARHGAP24Q8N264 748 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 UBA3Q8TBC4 463 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 TRAPPC12Q8WVT3 735 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 TEKT4Q8WW24 435 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 RXFP2Q8WXD0 754 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 MCUR1Q96AQ8 359 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 MIEF2Q96C03 454 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 SLC7A6OSQ96CW6 309 aaPredicted RBP7.28□□□□□ -1.24
TDP1-213ENST00000555880 ZNF668Q96K58 619 aaPredicted RBP7.28□□□□□ -1.24
TDP1-213ENST00000555880 RNF157Q96PX1 679 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 FAM111AQ96PZ2 611 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 TWNKQ96RR1 684 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 TBCBQ99426 244 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 WDR83Q9BRX9 315 aaKnown RBP7.28□□□□□ -1.24
TDP1-213ENST00000555880 NT5C1AQ9BXI3 368 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 NFKBIZQ9BYH8 718 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 SDCBP2Q9H190 292 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 VRTNQ9H8Y1 702 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 IL21Q9HBE4 155 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 IFT122Q9HBG6 1241 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 PNPLA8Q9NP80 782 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.28□□□□□ -1.24
TDP1-213ENST00000555880 SLC5A4Q9NY91 659 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 ERAP1Q9NZ08 941 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 HEY2Q9UBP5 337 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 ZC3H7BQ9UGR2 993 aaKnown RBP7.28□□□□□ -1.24
TDP1-213ENST00000555880 HMGXB4Q9UGU5 601 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 ITGA11Q9UKX5 1188 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 HEY1Q9Y5J3 304 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 TEX264Q9Y6I9 313 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 CITO14578 2027 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 KAT6AQ92794 2004 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 C2CD4BA6NLJ0 364 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 TRIM49D1C9J1S8 452 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 TRDMT1O14717 391 aaKnown RBP7.27□□□□□ -1.25
TDP1-213ENST00000555880 LIN7AO14910 233 aaPredicted RBP7.27□□□□□ -1.25
TDP1-213ENST00000555880 GYG2O15488 501 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 DNAJC6O75061 913 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 KRT38O76015 456 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 ENDOD1O94919 500 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 ARIH2O95376 493 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 IL1BP01584 269 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 APRTP07741 180 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 GJB1P08034 283 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 DHRS4L1P0CG22 281 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 T-ENOLP0DO92 83 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 FGFR1P11362 822 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 SDC4P31431 198 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 SERPINB4P48594 390 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 NDST1P52848 882 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 RBP5P82980 135 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 CDK16Q00536 496 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 SLC18A2Q05940 514 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 INCA1Q0VD86 236 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 FAAP100Q0VG06 881 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 ZRSR2Q15696 482 aaKnown RBP7.27□□□□□ -1.25
TDP1-213ENST00000555880 FAM187BQ17R55 369 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 ZNF484Q5JVG2 852 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 ATG16L1Q676U5 607 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 SCYL2Q6P3W7 929 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 LCLAT1Q6UWP7 414 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 NPNTQ6UXI9 565 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 FAM183BPQ6ZVS7 135 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 IGDCC3Q8IVU1 814 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 CDKL3Q8IVW4 592 aaPredicted RBP7.27□□□□□ -1.25
TDP1-213ENST00000555880 TMEM192Q8IY95 271 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 VPS52Q8N1B4 723 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 PPM1NQ8N819 430 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 ENDOVQ8N8Q3 282 aaKnown RBP7.27□□□□□ -1.25
TDP1-213ENST00000555880 CFAP61Q8NHU2 1237 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 RFWD2Q8NHY2 731 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 LRRC39Q96DD0 335 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 MTBPQ96DY7 904 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 NSL1Q96IY1 281 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 SERAC1Q96JX3 654 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 ZNF570Q96NI8 536 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 PEBP4Q96S96 227 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 SRPK1Q96SB4 655 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms