RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 ACOT2P49753 483 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 LIG4P49917 911 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 ATXN3P54252 364 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-218ENST00000555628 RPL10AP62906 217 aaKnown RBP9.73□□□□□ -0.85
PRKCH-218ENST00000555628 ATP2C1P98194 919 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-218ENST00000555628 TSPY1Q01534 308 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 POU5F1Q01860 360 aaKnown RBP9.73□□□□□ -0.85
PRKCH-218ENST00000555628 PTSQ03393 145 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 KCNB1Q14721 858 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 FAM171BQ6P995 826 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 PCSK4Q6UW60 755 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 TTC30AQ86WT1 665 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 TRIML1Q8N9V2 468 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 RNF217Q8TC41 542 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 DNASE2BQ8WZ79 361 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 SPATA17Q96L03 361 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 REEP2Q9BRK0 252 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 MSTO1Q9BUK6 570 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 IKZF4Q9H2S9 585 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 ARHGEF4Q9NR80 690 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 TMEM30AQ9NV96 361 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 DPP3Q9NY33 737 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 KCNG1Q9UIX4 513 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 GTF3C4Q9UKN8 822 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 PCDHB6Q9Y5E3 794 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 BSNQ9UPA5 3926 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 ZNF840PA6NDX5 716 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 H0YCG3 227 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 SCAMP3O14828 347 aaKnown RBP9.72□□□□□ -0.85
PRKCH-218ENST00000555628 HOXC11O43248 304 aaPredicted RBP9.72□□□□□ -0.85
PRKCH-218ENST00000555628 APODP05090 189 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 SYPP08247 313 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 ADH5P11766 374 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 SCP2P22307 547 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 ADSSP30520 456 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 MATR3P43243 847 aaKnown RBP eCLIP9.72□□□□□ -0.85
PRKCH-218ENST00000555628 GTF2BQ00403 316 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 KDSRQ06136 332 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 RESTQ13127 1097 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 TRIM29Q14134 588 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 ANKRD1Q15327 319 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 SV2CQ496J9 727 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 KRT79Q5XKE5 535 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 ZNF843Q8N446 348 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 KCTD17Q8N5Z5 321 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 C1orf127Q8N9H9 656 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 FBXO18Q8NFZ0 1043 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 C1orf216Q8TAB5 229 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 ZNF592Q92610 1267 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 BICD1Q96G01 975 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 FAM84AQ96KN4 292 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 CEP295NLQ96MC4 621 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 PRORYQ9H606 182 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 IL21RQ9HBE5 538 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 GDAP2Q9NXN4 497 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 DDX43Q9NXZ2 648 aaKnown RBP9.72□□□□□ -0.85
PRKCH-218ENST00000555628 BCCIPQ9P287 314 aaKnown RBP eCLIP9.72□□□□□ -0.85
PRKCH-218ENST00000555628 LARSQ9P2J5 1176 aaKnown RBP9.72□□□□□ -0.85
PRKCH-218ENST00000555628 ODF2LQ9ULJ1 636 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 APOBEC2Q9Y235 224 aaKnown RBP9.72□□□□□ -0.85
PRKCH-218ENST00000555628 FNDC3AQ9Y2H6 1198 aaKnown RBP9.72□□□□□ -0.85
PRKCH-218ENST00000555628 STARD13Q9Y3M8 1113 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 NFE2L3Q9Y4A8 694 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 BOD1L1Q8NFC6 3051 aa9.72□□□□□ -0.85
PRKCH-218ENST00000555628 UBR5O95071 2799 aaPredicted RBP9.72□□□□□ -0.85
PRKCH-218ENST00000555628 MYMKA6NI61 221 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 TRIM24O15164 1050 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 GREM1O60565 184 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 ATP2C2O75185 946 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 ATXN1LP0C7T5 689 aaKnown RBP9.71□□□□□ -0.86
PRKCH-218ENST00000555628 PLA2G4BP0C869 781 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 ANAPC15P60006 121 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 NOP14P78316 857 aaKnown RBP9.71□□□□□ -0.86
PRKCH-218ENST00000555628 CYP4F3Q08477 520 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 C19orf57Q0VDD7 668 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 LY6G5CQ5SRR4 150 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 EGFLAMQ63HQ2 1017 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 NT5DC4Q86YG4 428 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 TMEM86AQ8N2M4 240 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 ZNF513Q8N8E2 541 aaPredicted RBP9.71□□□□□ -0.86
PRKCH-218ENST00000555628 FSIP1Q8NA03 581 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 TERB1Q8NA31 727 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 TTC16Q8NEE8 873 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 KBTBD7Q8WVZ9 684 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 ZNF560Q96MR9 790 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 ACOX2Q99424 681 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 GABRG3Q99928 467 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 ZDHHC5Q9C0B5 715 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 CRTAC1Q9NQ79 661 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 SIX4Q9UIU6 781 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 NME7Q9Y5B8 376 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 CPQQ9Y646 472 aa9.71□□□□□ -0.86
PRKCH-218ENST00000555628 TMEM131Q92545 1883 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 CKAP5Q14008 2032 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 TRABD2BA6NFA1 517 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.7□□□□□ -0.86
PRKCH-218ENST00000555628 K7ENM7 598 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 MEN1O00255 615 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 LAD1O00515 517 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 SLC9A3R1O14745 358 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms