RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SCML4Q8N228 414 aa12.46□□□□□ -0.41
VRK1-204ENST00000555351 RPLP0P6Q8NHW5 317 aa12.46□□□□□ -0.41
VRK1-204ENST00000555351 USP33Q8TEY7 942 aa12.46□□□□□ -0.41
VRK1-204ENST00000555351 GAB3Q8WWW8 586 aa12.46□□□□□ -0.41
VRK1-204ENST00000555351 NT5C1BQ96P26 610 aa12.46□□□□□ -0.41
VRK1-204ENST00000555351 HINFPQ9BQA5 517 aa12.46□□□□□ -0.41
VRK1-204ENST00000555351 SPHK2Q9NRA0 654 aa12.46□□□□□ -0.41
VRK1-204ENST00000555351 C2orf42Q9NWW7 574 aa12.46□□□□□ -0.41
VRK1-204ENST00000555351 OSER1Q9NX31 292 aa12.46□□□□□ -0.41
VRK1-204ENST00000555351 MARK1Q9P0L2 795 aa12.46□□□□□ -0.41
VRK1-204ENST00000555351 HESX1Q9UBX0 185 aa12.46□□□□□ -0.41
VRK1-204ENST00000555351 LSM7Q9UK45 103 aaKnown RBP12.46□□□□□ -0.41
VRK1-204ENST00000555351 ZNF510Q9Y2H8 683 aa12.46□□□□□ -0.41
VRK1-204ENST00000555351 PTPRZ1P23471 2315 aaPredicted RBP12.45□□□□□ -0.42
VRK1-204ENST00000555351 A0A1W2PQH9 124 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 KAT7O95251 611 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 APBB3O95704 486 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 APODP05090 189 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 SETSIPP0DME0 302 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 CCDC192P0DO97 292 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 PRKCSHP14314 528 aaPredicted RBP12.45□□□□□ -0.42
VRK1-204ENST00000555351 PGFP49763 221 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 DMWDQ09019 674 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 BST2Q10589 180 aaKnown RBP12.45□□□□□ -0.42
VRK1-204ENST00000555351 DMC1Q14565 340 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 LY6G5CQ5SRR4 150 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 NAIF1Q69YI7 327 aaPredicted RBP12.45□□□□□ -0.42
VRK1-204ENST00000555351 KLHL10Q6JEL2 608 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 ERMP1Q7Z2K6 904 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 SCD5Q86SK9 330 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 PIGZQ86VD9 579 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 BBS7Q8IWZ6 715 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 LMO3Q8TAP4 145 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 KCTD13Q8WZ19 329 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 FAM81BQ96LP2 452 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 DCLK3Q9C098 648 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 NMUR1Q9HB89 426 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 WDR35Q9P2L0 1181 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 RWDD2AQ9UIY3 292 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 NAGPAQ9UK23 515 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 MMP17Q9ULZ9 603 aa12.45□□□□□ -0.42
VRK1-204ENST00000555351 PRR5-ARHGAP8B1AHC4 643 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 O00370 1275 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 ZBED1O96006 694 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 CHRM1P11229 460 aaPredicted RBP12.44□□□□□ -0.42
VRK1-204ENST00000555351 ID4P47928 161 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 DGKEP52429 567 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 ARHGAP8P85298 464 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 LMNB2Q03252 620 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 KCNH2Q12809 1159 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 CNGA2Q16280 664 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 MEA1Q16626 185 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 PKDCCQ504Y2 493 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 C10orf120Q5SQS8 335 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 LCLAT1Q6UWP7 414 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 Q6ZNB5 142 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 CLEC17AQ6ZS10 378 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 CACNA2D4Q7Z3S7 1137 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 C11orf74Q86VG3 221 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 TTC30AQ86WT1 665 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 KIAA2013Q8IYS2 634 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 PHTF2Q8N3S3 785 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 MLKLQ8NB16 471 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 EHBP1Q8NDI1 1231 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 ZC3H10Q96K80 434 aaKnown RBP12.44□□□□□ -0.42
VRK1-204ENST00000555351 ARHGEF4Q9NR80 690 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 OLA1Q9NTK5 396 aaKnown RBP12.44□□□□□ -0.42
VRK1-204ENST00000555351 DEC1Q9P2X7 70 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 TSPAN16Q9UKR8 245 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 CNTN6Q9UQ52 1028 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 CTNND2Q9UQB3 1225 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 STARD13Q9Y3M8 1113 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.44□□□□□ -0.42
VRK1-204ENST00000555351 CFAP54Q96N23 3096 aa12.44□□□□□ -0.42
VRK1-204ENST00000555351 EP300Q09472 2414 aaPredicted RBP12.43□□□□□ -0.42
VRK1-204ENST00000555351 BIN1O00499 593 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 AXIN1O15169 862 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 CACNG3O60359 315 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 RPP40O75818 363 aaKnown RBP12.43□□□□□ -0.42
VRK1-204ENST00000555351 TBX18O95935 607 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 AFPP02771 609 aaKnown RBP12.43□□□□□ -0.42
VRK1-204ENST00000555351 TGM1P22735 817 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 CHKAP35790 457 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 KIR2DL1P43626 348 aaPredicted RBP12.43□□□□□ -0.42
VRK1-204ENST00000555351 TKTL1P51854 596 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 PDE4CQ08493 712 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 GOLGA7BQ2TAP0 167 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 HEATR6Q6AI08 1181 aaKnown RBP12.43□□□□□ -0.42
VRK1-204ENST00000555351 CEP68Q76N32 757 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 ENOSF1Q7L5Y1 443 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 TRMT11Q7Z4G4 463 aaKnown RBP12.43□□□□□ -0.42
VRK1-204ENST00000555351 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.43□□□□□ -0.42
VRK1-204ENST00000555351 RASSF3Q86WH2 238 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 TMEM25Q86YD3 366 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 PPM1KQ8N3J5 372 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 DCLK2Q8N568 766 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 XPO6Q96QU8 1125 aaKnown RBP12.43□□□□□ -0.42
VRK1-204ENST00000555351 SRRTQ9BXP5 876 aaKnown RBP12.43□□□□□ -0.42
VRK1-204ENST00000555351 LRRC4Q9HBW1 653 aa12.43□□□□□ -0.42
VRK1-204ENST00000555351 CNGB3Q9NQW8 809 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms