RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 EXOC4Q96A65 974 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 NAP1L5Q96NT1 182 aaPredicted RBP11.14□□□□□ -0.63
TMEM260-206ENST00000555046 GANQ9H2C0 597 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 SLC2A4RGQ9NR83 387 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 OLA1Q9NTK5 396 aaKnown RBP11.14□□□□□ -0.63
TMEM260-206ENST00000555046 TMEM30AQ9NV96 361 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 TMEM51Q9NW97 253 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 ARHGAP26Q9UNA1 814 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 DUSP12Q9UNI6 340 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.14□□□□□ -0.63
TMEM260-206ENST00000555046 BPTFQ12830 3046 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 HEPACAM2A8MVW5 462 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 SLC9A3R1O14745 358 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-206ENST00000555046 CHADO15335 359 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 TEX33O43247 280 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 LSM8O95777 96 aaKnown RBP11.13□□□□□ -0.63
TMEM260-206ENST00000555046 ASGR2P07307 311 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 ATXN8OSP0DMR3 200 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 GLULP15104 373 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 TCF3P15923 654 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 FERP16591 822 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 KPNA1P52294 538 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-206ENST00000555046 MLLT6P55198 1093 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-206ENST00000555046 APBA1Q02410 837 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 ARHGAP29Q52LW3 1261 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 BTBD8Q5XKL5 378 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 PPP1R2P3Q6NXS1 205 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 PMF1Q6P1K2 205 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 TRIM72Q6ZMU5 477 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 TMEM110Q86TL2 294 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 SLC47A2Q86VL8 602 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 KIAA2013Q8IYS2 634 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 ARL14EPQ8N8R7 260 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-206ENST00000555046 RNF139Q8WU17 664 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 SYNCQ9H7C4 482 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 BRD9Q9H8M2 597 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 NLRC4Q9NPP4 1024 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 TRPV5Q9NQA5 729 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 ST7Q9NRC1 585 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 ABCC13Q9NSE7 274 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 GMIPQ9P107 970 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 TBC1D14Q9P2M4 693 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 DNMT3LQ9UJW3 386 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 NAGPAQ9UK23 515 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 FBXL21Q9UKT6 434 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 STRIP2Q9ULQ0 834 aa11.13□□□□□ -0.63
TMEM260-206ENST00000555046 MTCL1Q9Y4B5 1905 aaKnown RBP11.13□□□□□ -0.63
TMEM260-206ENST00000555046 HELZ2Q9BYK8 2649 aaKnown RBP11.12□□□□□ -0.63
TMEM260-206ENST00000555046 C2orf78A6NCI8 922 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 TLR5O60602 858 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 GFPT2O94808 682 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 OAS1P00973 400 aaKnown RBP11.12□□□□□ -0.63
TMEM260-206ENST00000555046 PDGFBP01127 241 aaPredicted RBP11.12□□□□□ -0.63
TMEM260-206ENST00000555046 TPM1P09493 284 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 MBL2P11226 248 aaPredicted RBP11.12□□□□□ -0.63
TMEM260-206ENST00000555046 RARGP13631 454 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 LCP1P13796 627 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 VIPR2P41587 438 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 RPL34P49207 117 aaKnown RBP11.12□□□□□ -0.63
TMEM260-206ENST00000555046 KLK7P49862 253 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 JAM2P57087 298 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 YWHAGP61981 247 aaKnown RBP eCLIP11.12□□□□□ -0.63
TMEM260-206ENST00000555046 COG7P83436 770 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 FCHO2Q0JRZ9 810 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 NR1H3Q13133 447 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 PDGFRLQ15198 375 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 TSR1Q2NL82 804 aaKnown RBP11.12□□□□□ -0.63
TMEM260-206ENST00000555046 STXBP5Q5T5C0 1151 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 RSRC2Q7L4I2 434 aaKnown RBP11.12□□□□□ -0.63
TMEM260-206ENST00000555046 BEND5Q7L4P6 421 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 ZDHHC17Q8IUH5 632 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 CSGALNACT1Q8TDX6 532 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 IPO4Q8TEX9 1081 aaKnown RBP11.12□□□□□ -0.63
TMEM260-206ENST00000555046 RSAD2Q8WXG1 361 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 DNASE1L2Q92874 299 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 USP13Q92995 863 aaPredicted RBP11.12□□□□□ -0.63
TMEM260-206ENST00000555046 MSANTD3Q96H12 275 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 PPP1R13BQ96KQ4 1090 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 CYP2S1Q96SQ9 504 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 NELL2Q99435 816 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 KXD1Q9BQD3 176 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 ZSWIM1Q9BR11 485 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 SLC4A5Q9BY07 1137 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 IFNKQ9P0W0 207 aa11.12□□□□□ -0.63
TMEM260-206ENST00000555046 BZW2Q9Y6E2 419 aaKnown RBP11.12□□□□□ -0.63
TMEM260-206ENST00000555046 A0A1W2PQH9 124 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 A0A1W2PQJ5 194 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 MAN2B1O00754 1011 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 COCHO43405 550 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 TADA3O75528 432 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 OLFM2O95897 454 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 GLI1P08151 1106 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 FCARP24071 287 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 GDI1P31150 447 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 GPC5P78333 572 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 CDR2Q01850 454 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 PRKCQQ04759 706 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 ADIGQ0VDE8 80 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 TRIM14Q14142 442 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 EFHC1Q5JVL4 640 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms