RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 TRIM24O15164 1050 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 GPR42O15529 346 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 CFIP05156 583 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 CYP21A2P08686 494 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 HNRNPA1P09651 372 aaKnown RBP eCLIP6.13□□□□□ -1.43
PSEN1-211ENST00000554995 MCM2P49736 904 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 MTHFSP49914 203 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 TIRAPP58753 221 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 CLCA4Q14CN2 919 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 ANKRD1Q15327 319 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 ZNF124Q15973 351 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 CYP2A13Q16696 494 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 LY6KQ17RY6 165 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 P3H1Q32P28 736 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 TMEM196Q5HYL7 178 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 SLC9C2Q5TAH2 1124 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 ATG16L1Q676U5 607 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 SLC9A4Q6AI14 798 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 DGAT2L7PQ6IED9 249 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 C4orf50Q6ZRC1 276 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 PIK3AP1Q6ZUJ8 805 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 IZUMO1Q8IYV9 350 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 METTL25Q8N6Q8 603 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 ST8SIA4Q92187 359 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 NACC2Q96BF6 587 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 FAM136AQ96C01 138 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 RNF31Q96EP0 1072 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 TOX2Q96NM4 488 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 AMBRA1Q9C0C7 1298 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 PAIP1Q9H074 479 aaKnown RBP6.13□□□□□ -1.43
PSEN1-211ENST00000554995 TBC1D22BQ9NU19 505 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 LAS1LQ9Y4W2 734 aaKnown RBP6.13□□□□□ -1.43
PSEN1-211ENST00000554995 XDHP47989 1333 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 ZAR1LA6NP61 321 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 GRXCR1A8MXD5 290 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 STX16-NPEPL1H3BU86 382 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 STX16O14662 325 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 PPM1DO15297 605 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 CYP27B1O15528 508 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 WDR47O94967 919 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 SCAF4O95104 1147 aaKnown RBP6.12□□□□□ -1.43
PSEN1-211ENST00000554995 LARGE1O95461 756 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 VNN1O95497 513 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 DDX58O95786 925 aaKnown RBP6.12□□□□□ -1.43
PSEN1-211ENST00000554995 PLATP00750 562 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 COMTP21964 271 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 GATA3P23771 443 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 PBX1P40424 430 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 PDCLQ13371 301 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 PDE1CQ14123 709 aaPredicted RBP6.12□□□□□ -1.43
PSEN1-211ENST00000554995 TBC1D10BQ4KMP7 808 aaPredicted RBP6.12□□□□□ -1.43
PSEN1-211ENST00000554995 CCDC30Q5VVM6 783 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 MAMDC4Q6UXC1 1216 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 RINLQ6ZS11 566 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 Q6ZSN1 163 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 CIR1Q86X95 450 aaPredicted RBP6.12□□□□□ -1.43
PSEN1-211ENST00000554995 SYNE4Q8N205 404 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 SLC22A17Q8WUG5 538 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 UCMAQ8WVF2 138 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 CENPIQ92674 756 aaPredicted RBP6.12□□□□□ -1.43
PSEN1-211ENST00000554995 ZUFSPQ96AP4 578 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 PAAF1Q9BRP4 392 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 ABHD16BQ9H3Z7 469 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 OLA1Q9NTK5 396 aaKnown RBP6.12□□□□□ -1.43
PSEN1-211ENST00000554995 LIN7CQ9NUP9 197 aaKnown RBP6.12□□□□□ -1.43
PSEN1-211ENST00000554995 AASSQ9UDR5 926 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 STEAP1Q9UHE8 339 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 DRG1Q9Y295 367 aaKnown RBP6.12□□□□□ -1.43
PSEN1-211ENST00000554995 MAP3K2Q9Y2U5 619 aa6.12□□□□□ -1.43
PSEN1-211ENST00000554995 GXYLT2A0PJZ3 443 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 VWA3AA6NCI4 1184 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 SLC38A8A6NNN8 435 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 EXOC5O00471 708 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 CTIFO43310 598 aaKnown RBP6.11□□□□□ -1.43
PSEN1-211ENST00000554995 TIMM44O43615 452 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 ERBB2P04626 1255 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 PDHA1P08559 390 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 DRD1P21728 446 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 GSTM5P46439 218 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.11□□□□□ -1.43
PSEN1-211ENST00000554995 MTAPQ13126 283 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 CTXN3Q4LDR2 81 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 LIMS2Q7Z4I7 341 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 LRRC71Q8N4P6 559 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 CCDC89Q8N998 374 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 USP38Q8NB14 1042 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 RFFLQ8WZ73 363 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 FAM89AQ96GI7 184 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 ACTRT3Q9BYD9 372 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 TPSD1Q9BZJ3 242 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 CCDC134Q9H6E4 229 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 TBX20Q9UMR3 447 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 JAG2Q9Y219 1238 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 ZBTB1Q9Y2K1 713 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 AFG3L2Q9Y4W6 797 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 PCDHB7Q9Y5E2 793 aa6.11□□□□□ -1.43
PSEN1-211ENST00000554995 MARCH11A6NNE9 402 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 RECQL4O94761 1208 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 CD19P15391 556 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 PPP3CBP16298 524 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms