RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 SERPINA13PQ6UXR4 307 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 CCDC146Q8IYE0 955 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 ACRBPQ8NEB7 543 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 ADAMTS18Q8TE60 1221 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 ZNF566Q969W8 418 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 MACROD1Q9BQ69 325 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 ZNF700Q9H0M5 742 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 ADARB2Q9NS39 739 aaKnown RBP4.74□□□□□ -1.65
SCFD1-214ENST00000554819 HNRNPDLO14979 420 aaKnown RBP4.73□□□□□ -1.65
SCFD1-214ENST00000554819 NCK2O43639 380 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 MT-CO3P00414 261 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 CHRM5P08912 532 aaPredicted RBP4.73□□□□□ -1.65
SCFD1-214ENST00000554819 IFIT2P09913 472 aaKnown RBP4.73□□□□□ -1.65
SCFD1-214ENST00000554819 TMEM225BP0DP42 221 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 HARSP12081 509 aaKnown RBP4.73□□□□□ -1.65
SCFD1-214ENST00000554819 FPR3P25089 353 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 ADRA1DP25100 572 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 SLC5A2P31639 672 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 DIO1P49895 249 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 RENBPP51606 427 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 LMAN2Q12907 356 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 GPS1Q13098 491 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 PMS2P11Q13670 270 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 TMEM119Q4V9L6 283 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.73□□□□□ -1.65
SCFD1-214ENST00000554819 KIAA0408Q6ZU52 694 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 BCDIN3DQ7Z5W3 292 aaKnown RBP4.73□□□□□ -1.65
SCFD1-214ENST00000554819 SRLQ86TD4 932 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 FAM186BQ8IYM0 893 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 PNPLA1Q8N8W4 532 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 SVIPQ8NHG7 77 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 SUN3Q8TAQ9 357 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 ASB2Q96Q27 587 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 MMS19Q96T76 1030 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 ELAC2Q9BQ52 826 aaKnown RBP4.73□□□□□ -1.65
SCFD1-214ENST00000554819 CERS4Q9HA82 394 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 NLRC4Q9NPP4 1024 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 GJB4Q9NTQ9 266 aa4.73□□□□□ -1.65
SCFD1-214ENST00000554819 PRRT4C9JH25 899 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 GCATO75600 419 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 WDR47O94967 919 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 EGR1P18146 543 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 EEF1GP26641 437 aaKnown RBP4.72□□□□□ -1.65
SCFD1-214ENST00000554819 GABRB3P28472 473 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 DGKQP52824 942 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 COPB1P53618 953 aaKnown RBP4.72□□□□□ -1.65
SCFD1-214ENST00000554819 ACOX1Q15067 660 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 SLC5A9Q2M3M2 681 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 FBXO38Q6PIJ6 1188 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 CHSY1Q86X52 802 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 CCDC28AQ8IWP9 274 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 METTL25Q8N6Q8 603 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 C12orf76Q8N812 135 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-214ENST00000554819 FAM71DQ8N9W8 422 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 PNLDC1Q8NA58 520 aaKnown RBP4.72□□□□□ -1.65
SCFD1-214ENST00000554819 DEPTORQ8TB45 409 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 WDYHV1Q96HA8 205 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 SEMA4CQ9C0C4 833 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 PCDHAC1Q9H158 963 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 TM7SF3Q9NS93 570 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 GAR1Q9NY12 217 aaKnown RBP4.72□□□□□ -1.65
SCFD1-214ENST00000554819 RGL1Q9NZL6 768 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 FLRT1Q9NZU1 646 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 LPAR3Q9UBY5 353 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 ZMYND8Q9ULU4 1186 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-214ENST00000554819 KAT6AQ92794 2004 aa4.72□□□□□ -1.65
SCFD1-214ENST00000554819 FNDC1Q4ZHG4 1894 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-214ENST00000554819 TCRBV5S1A1TA0A578 114 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 ZSCAN9O15535 394 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-214ENST00000554819 USP1O94782 785 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 NDST3O95803 873 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 ZNF37AP17032 561 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-214ENST00000554819 CERS1P27544 350 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 MCM5P33992 734 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 TXNL4AP83876 142 aaKnown RBP4.71□□□□□ -1.66
SCFD1-214ENST00000554819 CFHR3Q02985 330 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 ATP1A4Q13733 1029 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 MAPKAPK3Q16644 382 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 FAM187BQ17R55 369 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 SLC35G1Q2M3R5 365 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 DGKKQ5KSL6 1271 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 ABLIM2Q6H8Q1 611 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 TLDC1Q6P9B6 456 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 TMEM65Q6PI78 240 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 P3H2Q8IVL5 708 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 GLIS1Q8NBF1 620 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 DPF1Q92782 380 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 GJA10Q969M2 543 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 GRAMD1AQ96CP6 724 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 SGCZQ96LD1 299 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 HS6ST2Q96MM7 605 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 GDF15Q99988 308 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 CINPQ9BW66 212 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-214ENST00000554819 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.71□□□□□ -1.661e-17■■■□□ 18.3
SCFD1-214ENST00000554819 AS3MTQ9HBK9 375 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 MAFFQ9ULX9 164 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 FRMD4BQ9Y2L6 1034 aa4.71□□□□□ -1.66
SCFD1-214ENST00000554819 FAM234BA2RU67 622 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 OR2W5A6NFC9 320 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 WIPF3A6NGB9 483 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms