RNA–Protein interactions for RNA: ENST00000554627.5

MARK3-208, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-208ENST00000554627 CDC25CP30307 473 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 RFC1P35251 1148 aaPredicted RBP10.09□□□□□ -0.79
MARK3-208ENST00000554627 PTPN9P43378 593 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 TUBP50607 506 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 ZNF143P52747 638 aaPredicted RBP10.09□□□□□ -0.79
MARK3-208ENST00000554627 RNASE9P60153 205 aaKnown RBP10.09□□□□□ -0.79
MARK3-208ENST00000554627 USP46P62068 366 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 RPL7AP62424 266 aaKnown RBP10.09□□□□□ -0.79
MARK3-208ENST00000554627 TAF10Q12962 218 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 BSPRYQ5W0U4 402 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 LLGL2Q6P1M3 1020 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 TMEM184AQ6ZMB5 413 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 RSRC2Q7L4I2 434 aaKnown RBP10.09□□□□□ -0.79
MARK3-208ENST00000554627 PHLDB2Q86SQ0 1253 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 NIPA2Q8N8Q9 360 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 TPCN2Q8NHX9 752 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 RNF139Q8WU17 664 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 PIWIL1Q96J94 861 aaKnown RBP10.09□□□□□ -0.79
MARK3-208ENST00000554627 SLC2A13Q96QE2 648 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 CNPY3Q9BT09 278 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 GMIPQ9P107 970 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 ZMYM5Q9UJ78 669 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 COG5Q9UP83 839 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 PAXBP1Q9Y5B6 917 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 DUSP10Q9Y6W6 482 aa10.09□□□□□ -0.79
MARK3-208ENST00000554627 CLUHO75153 1309 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 A0A0U1RQJ8 604 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 A0A1W2PQH9 124 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 ESPNB1AK53 854 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 HAX1O00165 279 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 CCL16O15467 120 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 PROSCO94903 275 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 PAPLNO95428 1278 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 ZDHHC11BP0C7U3 371 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 NCAM1P13591 858 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 HOXB8P17481 243 aaPredicted RBP10.08□□□□□ -0.8
MARK3-208ENST00000554627 PTPN2P17706 415 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 PFKLP17858 780 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 GBP1P32455 592 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 FLT3P36888 993 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 MTMR3Q13615 1198 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 KCNC3Q14003 757 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 MESDQ14696 234 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 GRIN2CQ14957 1233 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 SLC25A52Q3SY17 297 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 DCAF6Q58WW2 860 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 TCEAL5Q5H9L2 206 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 SNX30Q5VWJ9 437 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 PDZD4Q76G19 769 aaPredicted RBP10.08□□□□□ -0.8
MARK3-208ENST00000554627 BHLHA9Q7RTU4 235 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 DEFB106AQ8N104 65 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 ZNF276Q8N554 614 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 JOSD2Q8TAC2 188 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 RXFP2Q8WXD0 754 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 ATRIPQ8WXE1 791 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 DDX23Q9BUQ8 820 aaKnown RBP10.08□□□□□ -0.8
MARK3-208ENST00000554627 PRKD2Q9BZL6 878 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 IGFLR1Q9H665 355 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 PIDD1Q9HB75 910 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 CHORDC1Q9UHD1 332 aaPredicted RBP10.08□□□□□ -0.8
MARK3-208ENST00000554627 SALL4Q9UJQ4 1053 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 CAPN6Q9Y6Q1 641 aa10.08□□□□□ -0.8
MARK3-208ENST00000554627 REV3LO60673 3130 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 CCDC195A0A1B0GUA6 201 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 GRID2IPA4D2P6 1211 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 ZNF197O14709 1029 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 SPOPO43791 374 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 BUB1BO60566 1050 aaPredicted RBP10.07□□□□□ -0.8
MARK3-208ENST00000554627 RFPL2O75678 378 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 PALMO75781 387 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 F9P00740 461 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 RARGP13631 454 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 DDX6P26196 483 aaKnown RBP eCLIP10.07□□□□□ -0.8
MARK3-208ENST00000554627 SULT1E1P49888 294 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 KPNA1P52294 538 aaPredicted RBP10.07□□□□□ -0.8
MARK3-208ENST00000554627 EPHA5P54756 1037 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 HYAL1Q12794 435 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 TAF5Q15542 800 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 ARHGAP15Q53QZ3 475 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 ZNF569Q5MCW4 686 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 MSANTD2Q6P1R3 559 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 SND1Q7KZF4 910 aaKnown RBP eCLIP10.07□□□□□ -0.8
MARK3-208ENST00000554627 STRADAQ7RTN6 431 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 PEX26Q7Z412 305 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 C17orf53Q8N3J3 647 aaPredicted RBP10.07□□□□□ -0.8
MARK3-208ENST00000554627 EMC1Q8N766 993 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 NDRG1Q92597 394 aaKnown RBP10.07□□□□□ -0.8
MARK3-208ENST00000554627 MRPS31Q92665 395 aaKnown RBP10.07□□□□□ -0.8
MARK3-208ENST00000554627 SERPINB11Q96P15 392 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 NACA2Q9H009 215 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 SMOC2Q9H3U7 446 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 FAM204AQ9H8W3 233 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.07□□□□□ -0.8
MARK3-208ENST00000554627 AMFRQ9UKV5 643 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.07□□□□□ -0.8
MARK3-208ENST00000554627 MTCH2Q9Y6C9 303 aa10.07□□□□□ -0.8
MARK3-208ENST00000554627 KIF26AQ9ULI4 1882 aaPredicted RBP10.06□□□□□ -0.8
MARK3-208ENST00000554627 ZNF840PA6NDX5 716 aa10.06□□□□□ -0.8
MARK3-208ENST00000554627 SOBPA7XYQ1 873 aa10.06□□□□□ -0.8
MARK3-208ENST00000554627 TMEM110-MUSTN1A8MSY1 372 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms