RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PREPLQ4J6C6 727 aaPredicted RBP6.3□□□□□ -1.4
VPS33B-203ENST00000554264 CEP85LQ5SZL2 805 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 ZNF648Q5T619 568 aaPredicted RBP6.3□□□□□ -1.4
VPS33B-203ENST00000554264 WLSQ5T9L3 541 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 YOD1Q5VVQ6 348 aaPredicted RBP6.3□□□□□ -1.4
VPS33B-203ENST00000554264 C6orf89Q6UWU4 347 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 BTNL9Q6UXG8 535 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 STXBP4Q6ZWJ1 553 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 ARMCX2Q7L311 632 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 SLFN11Q7Z7L1 901 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 ANKRD35Q8N283 1001 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 RASGEF1CQ8N431 466 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 TMEM145Q8NBT3 493 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 CHST13Q8NET6 341 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 ST13P5Q8NFI4 369 aaPredicted RBP6.3□□□□□ -1.4
VPS33B-203ENST00000554264 ERMNQ8TAM6 284 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 SCFD2Q8WU76 684 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 RIN2Q8WYP3 895 aaPredicted RBP6.3□□□□□ -1.4
VPS33B-203ENST00000554264 DYNLL2Q96FJ2 89 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 PGM2Q96G03 612 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 SGSM3Q96HU1 749 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 DRC1Q96MC2 740 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 TMEM60Q9H2L4 133 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 RIOX1Q9H6W3 641 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 MLXIPQ9HAP2 919 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 BATF3Q9NR55 127 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 ARHGEF4Q9NR80 690 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 SIRPGQ9P1W8 387 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 PFDN2Q9UHV9 154 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 NFU1Q9UMS0 254 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 PLAAQ9Y263 795 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 CTDP1Q9Y5B0 961 aaPredicted RBP6.3□□□□□ -1.4
VPS33B-203ENST00000554264 MTCH2Q9Y6C9 303 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 SMCHD1A6NHR9 2005 aa6.3□□□□□ -1.4
VPS33B-203ENST00000554264 NPHP3-ACAD11A0A0J9YXS1 232 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 MYOCOSA0A1B0GUC4 107 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 FRMD3A2A2Y4 597 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 C7orf72A4D263 438 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 MYMKA6NI61 221 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 ASB14A6NK59 587 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 MIF4GDA9UHW6 222 aaKnown RBP6.29□□□□□ -1.4
VPS33B-203ENST00000554264 E7EVH7 732 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 PODXLO00592 558 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 PDXKO00764 312 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 ASAP2O43150 1006 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 ADCY6O43306 1168 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 DLX3O60479 287 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 RASSF9O75901 435 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 KRT1P04264 644 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 SNRPB2P08579 225 aaKnown RBP6.29□□□□□ -1.4
VPS33B-203ENST00000554264 NUDT17P0C025 328 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 SUPT20HL2P0C7V6 817 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 CYP2D6P10635 497 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 ACTN1P12814 892 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 MYOGP15173 224 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 GAP43P17677 238 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 PAMP19021 973 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 MUTP22033 750 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 L1CAMP32004 1257 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 ECI1P42126 302 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 TECP42680 631 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 MATR3P43243 847 aaKnown RBP eCLIP6.29□□□□□ -1.49e-6■■□□□ 12
VPS33B-203ENST00000554264 HADHBP55084 474 aaKnown RBP6.29□□□□□ -1.4
VPS33B-203ENST00000554264 CCL23P55773 120 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 CYP4F8P98187 520 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 TNFAIP2Q03169 654 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 GFPT1Q06210 699 aaPredicted RBP6.29□□□□□ -1.4
VPS33B-203ENST00000554264 ADCY2Q08462 1091 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 COASYQ13057 564 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 XRCC4Q13426 336 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 HLTFQ14527 1009 aaKnown RBP eCLIP6.29□□□□□ -1.4
VPS33B-203ENST00000554264 GPATCH4Q5T3I0 446 aaKnown RBP6.29□□□□□ -1.4
VPS33B-203ENST00000554264 ADGRF1Q5T601 910 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 C16orf86Q6ZW13 317 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 TAOK1Q7L7X3 1001 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 TLK2Q86UE8 772 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 JAMLQ86YT9 394 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 APLFQ8IW19 511 aaPredicted RBP6.29□□□□□ -1.4
VPS33B-203ENST00000554264 POU5F2Q8N7G0 328 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 CFAP61Q8NHU2 1237 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 PHOSPHO2Q8TCD6 241 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 TBCKQ8TEA7 893 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 CASKIN2Q8WXE0 1202 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 IFT81Q8WYA0 676 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 CUL5Q93034 780 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 ARL8AQ96BM9 186 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 MTMR8Q96EF0 704 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 CYFIP2Q96F07 1278 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 CCDC114Q96M63 670 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 SPAG5Q96R06 1193 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 KRT12Q99456 494 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 TMEM47Q9BQJ4 181 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 MMTAG2Q9BU76 263 aaKnown RBP6.29□□□□□ -1.4
VPS33B-203ENST00000554264 TMEM109Q9BVC6 243 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 KRTAP9-2Q9BYQ4 174 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 AP5M1Q9H0R1 490 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 SLC6A17Q9H1V8 727 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 CARD9Q9H257 536 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 CCDC134Q9H6E4 229 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 ZNF552Q9H707 407 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms