RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 NCAM1P13591 858 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 DNAJB1P25685 340 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 KLRC2P26717 231 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 MIPP30301 263 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 PTPN7P35236 360 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 PPP3CCP48454 512 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 GPR15P49685 360 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 CDR1P51861 262 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 EPHB3P54753 998 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 AIF1P55008 147 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 ERVFC1P60507 584 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 COPS2P61201 443 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 USP46P62068 366 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 SMAD3P84022 425 aaKnown RBP7.99□□□□□ -1.13
TDP1-209ENST00000554180 SLC25A11Q02978 314 aaKnown RBP7.99□□□□□ -1.13
TDP1-209ENST00000554180 ITIH3Q06033 890 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 NNTQ13423 1086 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 GPM6BQ13491 265 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 BOLA3Q53S33 107 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 SEL1L2Q5TEA6 688 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 PLPP4Q5VZY2 271 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 BSPRYQ5W0U4 402 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 BTBD8Q5XKL5 378 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 PPP2R2DQ66LE6 453 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 MSANTD2Q6P1R3 559 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 ELMSAN1Q6PJG2 1045 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 HFE2Q6ZVN8 426 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 ZNF572Q7Z3I7 529 aaPredicted RBP7.99□□□□□ -1.13
TDP1-209ENST00000554180 ITIH5Q86UX2 942 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 CREG2Q8IUH2 290 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 PSTKQ8IV42 348 aaKnown RBP7.99□□□□□ -1.13
TDP1-209ENST00000554180 RASGEF1CQ8N431 466 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 ZNF276Q8N554 614 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 ARFGAP1Q8N6T3 406 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 CEP112Q8N8E3 955 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 EXD1Q8NHP7 514 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 ACTRT1Q8TDG2 376 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 FAM172AQ8WUF8 416 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 HDAC7Q8WUI4 952 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 TEKT4Q8WW24 435 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 KRT35Q92764 455 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 FBXO32Q969P5 355 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 PSMG2Q969U7 264 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 RBM41Q96IZ5 413 aaKnown RBP7.99□□□□□ -1.13
TDP1-209ENST00000554180 SMOC2Q9H3U7 446 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 PLEKHA4Q9H4M7 779 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 SLC28A3Q9HAS3 691 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 TLR8Q9NR97 1041 aaKnown RBP7.99□□□□□ -1.13
TDP1-209ENST00000554180 OLA1Q9NTK5 396 aaKnown RBP7.99□□□□□ -1.13
TDP1-209ENST00000554180 UXTQ9UBK9 157 aaPredicted RBP7.99□□□□□ -1.13
TDP1-209ENST00000554180 DPP7Q9UHL4 492 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 MTUS1Q9ULD2 1270 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 USP18Q9UMW8 372 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 USTQ9Y2C2 406 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 CHD9Q3L8U1 2897 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 LAMA2P24043 3122 aaKnown RBP7.98□□□□□ -1.13
TDP1-209ENST00000554180 A0A1W2PPC1 479 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 A0A1W2PQH9 124 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 HIDE1A8MVS5 230 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 ZNF487B1APH4 448 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 PGRMC1O00264 195 aaKnown RBP7.98□□□□□ -1.13
TDP1-209ENST00000554180 SOAT2O75908 522 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 ZRANB2O95218 330 aaKnown RBP eCLIP7.98□□□□□ -1.13
TDP1-209ENST00000554180 TRUB2O95900 331 aaKnown RBP7.98□□□□□ -1.13
TDP1-209ENST00000554180 IGLV3-25P01717 112 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 POU2F2P09086 479 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 RALAP11233 206 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 HMGA1P17096 107 aaKnown RBP7.98□□□□□ -1.13
TDP1-209ENST00000554180 HOXA9P31269 272 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 GBP1P32455 592 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 CA8P35219 290 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 RDXP35241 583 aaKnown RBP7.98□□□□□ -1.13
TDP1-209ENST00000554180 PBX2P40425 430 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 CETN2P41208 172 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 PAFAH1B1P43034 410 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 SSR1P43307 286 aaKnown RBP7.98□□□□□ -1.13
TDP1-209ENST00000554180 MARCKSL1P49006 195 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 SULT1E1P49888 294 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 TUBP50607 506 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 DNA2P51530 1060 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 CLCN4P51793 760 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 ZNF135P52742 658 aaPredicted RBP7.98□□□□□ -1.13
TDP1-209ENST00000554180 HDAC4P56524 1084 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 TAS2R40P59535 323 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 TUBB4BP68371 445 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 ATP11AP98196 1134 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 SCAPQ12770 1279 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 TAF10Q12962 218 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 MTA1Q13330 715 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 CAMK1Q14012 370 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 TAF12Q16514 161 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 PPP2R5EQ16537 467 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 PTPROQ16827 1216 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 CDO1Q16878 200 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 C15orf59Q2T9L4 293 aaPredicted RBP7.98□□□□□ -1.13
TDP1-209ENST00000554180 CCDC181Q5TID7 509 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 DCAF12L1Q5VU92 463 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 SDHAF4Q5VUM1 108 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 OTUD1Q5VV17 481 aaPredicted RBP7.98□□□□□ -1.13
TDP1-209ENST00000554180 SNX30Q5VWJ9 437 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms