RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 ZNF512Q96ME7 567 aaPredicted RBP10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 SLC2A13Q96QE2 648 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 CDK5RAP1Q96SZ6 601 aaKnown RBP10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 TRIM7Q9C029 511 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 PLEKHA4Q9H4M7 779 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 CERS4Q9HA82 394 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 RRAGDQ9NQL2 400 aaPredicted RBP10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 DDX56Q9NY93 547 aaKnown RBP10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 IL37Q9NZH6 218 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 SNX12Q9UMY4 172 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 MAGED2Q9UNF1 606 aaPredicted RBP10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 YIPF1Q9Y548 306 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 PCDHA3Q9Y5H8 950 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 INSL5Q9Y5Q6 135 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 HIDE1A8MVS5 230 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 KCNK3O14649 394 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 PSTPIP1O43586 416 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 NCK2O43639 380 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 ARHGEF15O94989 841 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 VNN2O95498 520 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 SPATA31D3P0C874 917 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 DNAJB1P25685 340 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 CTNNA2P26232 953 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 CTNNA1P35221 906 aaKnown RBP10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 PCK1P35558 622 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 FLT3P36888 993 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 SULT1E1P49888 294 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 ATP11AP98196 1134 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 DEUP1Q05D60 604 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 TAF10Q12962 218 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 CDO1Q16878 200 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 CCDC14Q49A88 953 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 PABPC1LQ4VXU2 614 aaKnown RBP10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 BOLA3Q53S33 107 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 PPM1LQ5SGD2 360 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 CCDC181Q5TID7 509 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 LRRC38Q5VT99 294 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 SCYL2Q6P3W7 929 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 LILRA6Q6PI73 481 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 SPATA31D4Q6ZUB0 917 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 STRADAQ7RTN6 431 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 STKLD1Q8NE28 680 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 SLC7A14Q8TBB6 771 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 HDAC7Q8WUI4 952 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 NDRG1Q92597 394 aaKnown RBP10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 KHSRPQ92945 711 aaKnown RBP eCLIP10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 PIWIL1Q96J94 861 aaKnown RBP10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 CFAP57Q96MR6 1250 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 TTLL2Q9BWV7 592 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 TLR10Q9BXR5 811 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 CRISPLD1Q9H336 500 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 GOLPH3Q9H4A6 298 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 TLE6Q9H808 572 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 OLA1Q9NTK5 396 aaKnown RBP10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 TRPM5Q9NZQ8 1165 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 RNF14Q9UBS8 474 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 FBXW11Q9UKB1 542 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 TSC2P49815 1807 aa10.93□□□□□ -0.66
TMEM55B-205ENST00000554028 A0A1W2PPC1 479 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 A0A1W2PQH9 124 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 FAM92AA1XBS5 289 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 M0QYT0 321 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 CES2O00748 559 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 ZRANB2O95218 330 aaKnown RBP eCLIP10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 FGF19O95750 216 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 C8AP07357 584 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 ATF6P18850 670 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 RDXP35241 583 aaKnown RBP10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 CLCN4P51793 760 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 OGDHQ02218 1023 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 CKAP4Q07065 602 aaKnown RBP10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 ARL13BQ3SXY8 428 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 SEL1L2Q5TEA6 688 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 POLNQ7Z5Q5 900 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 DNAJB7Q7Z6W7 309 aaPredicted RBP10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 FAM172AQ8WUF8 416 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 EDEM1Q92611 657 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 RNF34Q969K3 372 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 PSMG2Q969U7 264 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 RBM41Q96IZ5 413 aaKnown RBP10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 GCNAQ96QF7 691 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 OSBPL9Q96SU4 736 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 PSMB7Q99436 277 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 NAP1L3Q99457 506 aaPredicted RBP10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 CDCA3Q99618 268 aaPredicted RBP10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 NACA2Q9H009 215 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 CARD9Q9H257 536 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 FAM204AQ9H8W3 233 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 CLIC5Q9NZA1 410 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 GMIPQ9P107 970 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 CDC23Q9UJX2 597 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 USP18Q9UMW8 372 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 PACSIN2Q9UNF0 486 aaPredicted RBP10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 NAALADL1Q9UQQ1 740 aa10.92□□□□□ -0.66
TMEM55B-205ENST00000554028 SYNJ2BP-COX16A0A087WUM0 186 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 CEP104O60308 925 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 CLASP2O75122 1294 aaKnown RBP10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 XYLBO75191 536 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 LRCH4O75427 683 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 HNRNPA1P09651 372 aaKnown RBP eCLIP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms