RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 TM9SF2Q99805 663 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 ARNT2Q9HBZ2 717 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 SLCO1B3Q9NPD5 702 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 KCNN3Q9UGI6 736 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 EMSYQ7Z589 1322 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 FAM172BPA6NC97 362 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 SYNDIG1LA6NDD5 238 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 GPC4O75487 556 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 TAF5LO75529 589 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 PIAS1O75925 651 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 HSPA13P48723 471 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 NPEPPSP55786 919 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 TYSND1Q2T9J0 566 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 Q3ZCU0 254 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 NEPROQ6NW34 567 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 SLCO6A1Q86UG4 719 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 TRIM59Q8IWR1 403 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 SYNPOQ8N3V7 929 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 USP38Q8NB14 1042 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 DNAJC7Q99615 494 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 FBXO28Q9NVF7 368 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 YARS2Q9Y2Z4 477 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 M0QZ92 97 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 UFL1O94874 794 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 CD300CQ08708 224 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 CLCA4Q14CN2 919 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 OCLNQ16625 522 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 UAP1L1Q3KQV9 507 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 CREG2Q8IUH2 290 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 IQCKQ8N0W5 287 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 DCUN1D1Q96GG9 259 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 SLC4A9Q96Q91 983 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 PFDN5Q99471 154 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 GDF3Q9NR23 364 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 MAP10Q9P2G4 905 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 CRNNQ9UBG3 495 aaPredicted RBP9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 ASH2LQ9UBL3 628 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 DNAJB4Q9UDY4 337 aa9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 SCAF8Q9UPN6 1271 aaKnown RBP9.27□□□□□ -0.92
GTF2A1-203ENST00000553612 PP2D1A8MPX8 630 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 TP73O15350 636 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 GPAA1O43292 621 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 AQP9O43315 295 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 GAS2O43903 313 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 DFNA5O60443 496 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 TOMM70O94826 608 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 FUCA1P04066 466 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 HLA-DPA1P20036 260 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 HOXD10P28358 340 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 MSX2P35548 267 aaPredicted RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 SERPINB5P36952 375 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 SLC25A3Q00325 362 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 CAVIN4Q5BKX8 364 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF658Q5TYW1 1059 aaPredicted RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 CFAP77Q6ZQR2 320 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 FKBP9P1Q75LS8 142 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 PTAR1Q7Z6K3 402 aaPredicted RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 IFNL3Q8IZI9 196 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF398Q8TD17 642 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 SEMA4AQ9H3S1 761 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 UGT2A1Q9Y4X1 527 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 POGZQ7Z3K3 1410 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 IGF1RP08069 1367 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 KANSL1LA0AUZ9 987 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 CCDC188H7C350 402 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 GSC2O15499 205 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 PABPC4LP0CB38 370 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 CLUP10909 449 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 GALK2Q01415 458 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 GBE1Q04446 702 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 LRRC74AQ0VAA2 488 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 PTPN20Q4JDL3 420 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 FAM209BQ5JX69 171 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 TIGD3Q6B0B8 471 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 SPOPLQ6IQ16 392 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 ARMC6Q6NXE6 501 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 FNIP1Q8TF40 1166 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 BTBD2Q9BX70 525 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 SLC24A2Q9UI40 661 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 POFUT2Q9Y2G5 429 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 BOLA1Q9Y3E2 137 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 NEU2Q9Y3R4 380 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 WDR7Q9Y4E6 1490 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 IQANK1A0A1B0GTG1 560 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 GTPBP10A4D1E9 387 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 KCNH1O95259 989 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 CACNB3P54284 484 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 MOGQ16653 247 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF829Q3KNS6 432 aaPredicted RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 ADGRG6Q86SQ4 1221 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF354CQ86Y25 554 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 CD302Q8IX05 232 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF444Q8N0Y2 327 aaPredicted RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 UPF3AQ9H1J1 476 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF225Q9UK10 706 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 SNX7Q9UNH6 387 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 EPRSP07814 1512 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 ZBTB39O15060 712 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 PPP6R2O75170 966 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 SNRPD2P62316 118 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms