RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 F8VP50 259 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 COCHO43405 550 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 TRAK2O60296 914 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 LMO2P25791 158 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 CLDN6P56747 220 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 GTF2BQ00403 316 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 SRSF1Q07955 248 aaKnown RBP eCLIP14.69□□□□□ -0.06
PRPF39-204ENST00000553605 CCDC173Q0VFZ6 552 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 STARD3Q14849 445 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 SCARA3Q6AZY7 606 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 FMNL3Q8IVF7 1028 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 CACTINQ8WUQ7 758 aaKnown RBP14.69□□□□□ -0.06
PRPF39-204ENST00000553605 TMEM176AQ96HP8 235 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 C8orf48Q96LL4 319 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 DUSP9Q99956 384 aaKnown RBP14.69□□□□□ -0.06
PRPF39-204ENST00000553605 REEP2Q9BRK0 252 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 NUP58Q9BVL2 599 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 MKRN2Q9H000 416 aaKnown RBP14.69□□□□□ -0.06
PRPF39-204ENST00000553605 CRTAC1Q9NQ79 661 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 ANKRD6Q9Y2G4 727 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 STYXL1Q9Y6J8 313 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 CABIN1Q9Y6J0 2220 aa14.69□□□□□ -0.06
PRPF39-204ENST00000553605 NEDD8-MDP1E9PL57 170 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 CACNG3O60359 315 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 FAM13AO94988 1023 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 CDK4P11802 303 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 ABCD1P33897 745 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 CCT8P50990 548 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 RHDQ02161 417 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 IFRD2Q12894 506 aaPredicted RBP14.68□□□□□ -0.06
PRPF39-204ENST00000553605 GNL2Q13823 731 aaKnown RBP14.68□□□□□ -0.06
PRPF39-204ENST00000553605 TEAD4Q15561 434 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 INAVAQ3KP66 663 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 DPH6Q7L8W6 267 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 SPACA3Q8IXA5 215 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 IGSF8Q969P0 613 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 PCED1BQ96HM7 432 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 C8orf76Q96K31 380 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 BBS2Q9BXC9 721 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 SEMA4CQ9C0C4 833 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 PARVGQ9HBI0 331 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 SLCO1B1Q9Y6L6 691 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 STON1Q9Y6Q2 735 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 COL6A6A6NMZ7 2263 aa14.68□□□□□ -0.06
PRPF39-204ENST00000553605 H0Y8X5 98 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 LAD1O00515 517 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 KRT19P08727 400 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 PDGFRBP09619 1106 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 C6P13671 934 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 TYRP14679 529 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 PRPHP41219 470 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 IL12RB1P42701 662 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 ZNF131P52739 623 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 ZNF132P52740 706 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 WNT7BP56706 349 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 RBP5P82980 135 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 KCNH2Q12809 1159 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 HECTD3Q5T447 861 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 CENPQQ7L2Z9 268 aaPredicted RBP14.67□□□□□ -0.06
PRPF39-204ENST00000553605 TMPRSS6Q8IU80 811 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 CXorf38Q8TB03 319 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 POMGNT1Q8WZA1 660 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 SNX19Q92543 992 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 PRCCQ92733 491 aaPredicted RBP14.67□□□□□ -0.06
PRPF39-204ENST00000553605 WBP2Q969T9 261 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 SIPA1Q96FS4 1042 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 CDK5RAP3Q96JB5 506 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 WDR35Q9P2L0 1181 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 CHORDC1Q9UHD1 332 aaPredicted RBP14.67□□□□□ -0.06
PRPF39-204ENST00000553605 ITGA11Q9UKX5 1188 aa14.67□□□□□ -0.06
PRPF39-204ENST00000553605 KNL1Q8NG31 2342 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 ENC1O14682 589 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 BRINP1O60477 761 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 RFPL3O75679 317 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 IGLV3-19P01714 112 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 C1SP09871 688 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 IRF1P10914 325 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 ACADMP11310 421 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 YWHAQP27348 245 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 ACTN2P35609 894 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 DGKGP49619 791 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 TOB1P50616 345 aaPredicted RBP14.66□□□□□ -0.06
PRPF39-204ENST00000553605 IL9RQ01113 521 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 TPGS1Q6ZTW0 290 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 USP49Q70CQ1 688 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 HS2ST1Q7LGA3 356 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 PDZD8Q8NEN9 1154 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 MYCBPAPQ8TBZ2 947 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 KBTBD7Q8WVZ9 684 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 FIZ1Q96SL8 496 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 PCED1AQ9H1Q7 454 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 ZHX3Q9H4I2 956 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 TM9SF3Q9HD45 589 aa14.66□□□□□ -0.06
PRPF39-204ENST00000553605 PAPSS1O43252 624 aaPredicted RBP14.65□□□□□ -0.06
PRPF39-204ENST00000553605 SLC28A2O43868 658 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 LDOC1O95751 146 aaPredicted RBP14.65□□□□□ -0.06
PRPF39-204ENST00000553605 CISD3P0C7P0 127 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 ADSSP30520 456 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 GRIA4P48058 902 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 LY6DQ14210 128 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms