RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 EGFP01133 1207 aa24.81■■□□□ 1.56
TDP1-205ENST00000553527 TPM2P07951 284 aa24.81■■□□□ 1.56
TDP1-205ENST00000553527 HOXD11P31277 338 aaPredicted RBP24.81■■□□□ 1.56
TDP1-205ENST00000553527 NBL1P41271 181 aa24.81■■□□□ 1.56
TDP1-205ENST00000553527 BST2Q10589 180 aaKnown RBP24.81■■□□□ 1.56
TDP1-205ENST00000553527 CCINQ13939 588 aa24.81■■□□□ 1.56
TDP1-205ENST00000553527 ARHGAP44Q17R89 818 aa24.81■■□□□ 1.56
TDP1-205ENST00000553527 TMEM196Q5HYL7 178 aa24.81■■□□□ 1.56
TDP1-205ENST00000553527 CCDC186Q7Z3E2 898 aa24.81■■□□□ 1.56
TDP1-205ENST00000553527 CYLDQ9NQC7 956 aa24.81■■□□□ 1.56
TDP1-205ENST00000553527 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.81■■□□□ 1.56
TDP1-205ENST00000553527 TAB2Q9NYJ8 693 aa24.81■■□□□ 1.56
TDP1-205ENST00000553527 MYO15AQ9UKN7 3530 aa24.81■■□□□ 1.56
TDP1-205ENST00000553527 E2F8A0AVK6 867 aa24.8■■□□□ 1.56
TDP1-205ENST00000553527 PIK3R2O00459 728 aa24.8■■□□□ 1.56
TDP1-205ENST00000553527 PES1O00541 588 aaKnown RBP24.8■■□□□ 1.56
TDP1-205ENST00000553527 RALAP11233 206 aa24.8■■□□□ 1.56
TDP1-205ENST00000553527 RGS7P49802 495 aa24.8■■□□□ 1.56
TDP1-205ENST00000553527 KRT31Q15323 416 aa24.8■■□□□ 1.56
TDP1-205ENST00000553527 EXOC3L4Q17RC7 722 aa24.8■■□□□ 1.56
TDP1-205ENST00000553527 TRIM65Q6PJ69 517 aa24.8■■□□□ 1.56
TDP1-205ENST00000553527 CD101Q93033 1021 aa24.8■■□□□ 1.56
TDP1-205ENST00000553527 ZSWIM1Q9BR11 485 aa24.8■■□□□ 1.56
TDP1-205ENST00000553527 ANP32EQ9BTT0 268 aa24.8■■□□□ 1.56
TDP1-205ENST00000553527 KLF16Q9BXK1 252 aaPredicted RBP24.8■■□□□ 1.56
TDP1-205ENST00000553527 ULBP1Q9BZM6 244 aa24.8■■□□□ 1.56
TDP1-205ENST00000553527 TBC1D14Q9P2M4 693 aa24.8■■□□□ 1.56
TDP1-205ENST00000553527 DNMT3LQ9UJW3 386 aa24.8■■□□□ 1.56
TDP1-205ENST00000553527 FBXO4Q9UKT5 387 aa24.8■■□□□ 1.56
TDP1-205ENST00000553527 M0QYV0 167 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 ZBED1O96006 694 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 CYP17A1P05093 508 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 LCP1P13796 627 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 USP8P40818 1118 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 CXCL12P48061 93 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 PSEN1P49768 467 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 MFAP3P55082 362 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 SATB1Q01826 763 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 ADIGQ0VDE8 80 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 DHCR24Q15392 516 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 CNGA2Q16280 664 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 VWA3BQ502W6 1294 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 RAB41Q5JT25 222 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 LCLAT1Q6UWP7 414 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 MIB1Q86YT6 1006 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 BBS7Q8IWZ6 715 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 EXOC4Q96A65 974 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 FANCMQ8IYD8 2048 aa24.79■■□□□ 1.56
TDP1-205ENST00000553527 ATP1A3P13637 1013 aa24.78■■□□□ 1.56
TDP1-205ENST00000553527 PON1P27169 355 aa24.78■■□□□ 1.56
TDP1-205ENST00000553527 CCR3P51677 355 aa24.78■■□□□ 1.56
TDP1-205ENST00000553527 YWHAGP61981 247 aaKnown RBP eCLIP24.78■■□□□ 1.56
TDP1-205ENST00000553527 GOLGA8FQ08AF8 430 aa24.78■■□□□ 1.56
TDP1-205ENST00000553527 GOLGA8DPQ0D2H9 430 aa24.78■■□□□ 1.56
TDP1-205ENST00000553527 RHBDF2Q6PJF5 856 aa24.78■■□□□ 1.56
TDP1-205ENST00000553527 TADA2BQ86TJ2 420 aa24.78■■□□□ 1.56
TDP1-205ENST00000553527 SPEM1Q8N4L4 309 aa24.78■■□□□ 1.56
TDP1-205ENST00000553527 SECISBP2LQ93073 1101 aaKnown RBP24.78■■□□□ 1.56
TDP1-205ENST00000553527 NKD2Q969F2 451 aaPredicted RBP24.78■■□□□ 1.56
TDP1-205ENST00000553527 NDST4Q9H3R1 872 aa24.78■■□□□ 1.56
TDP1-205ENST00000553527 LIMA1Q9UHB6 759 aaKnown RBP24.78■■□□□ 1.56
TDP1-205ENST00000553527 RASAL2Q9UJF2 1139 aa24.78■■□□□ 1.56
TDP1-205ENST00000553527 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.78■■□□□ 1.56
TDP1-205ENST00000553527 GFRA3O60609 400 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 HMBSP08397 361 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 SETSIPP0DME0 302 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 DRD1P21728 446 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 PLA2G4AP47712 749 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 EFEMP1Q12805 493 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 PPP2R5DQ14738 602 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 MIIPQ5JXC2 388 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 LY6G5CQ5SRR4 150 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 RSRC2Q7L4I2 434 aaKnown RBP24.77■■□□□ 1.56
TDP1-205ENST00000553527 SIX6OS1Q8N1H7 587 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 ARHGAP18Q8N392 663 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 IER2Q9BTL4 223 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 VPS16Q9H269 839 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 C2orf42Q9NWW7 574 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 CLIC5Q9NZA1 410 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 APEX2Q9UBZ4 518 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 USP34Q70CQ2 3546 aa24.77■■□□□ 1.56
TDP1-205ENST00000553527 PROB1E7EW31 1015 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 RNF40O75150 1001 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 SLC6A11P48066 632 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 ZNF132P52740 706 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 COPB1P53618 953 aaKnown RBP24.76■■□□□ 1.55
TDP1-205ENST00000553527 STILQ15468 1287 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 ANO4Q32M45 955 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 ZNF528Q3MIS6 628 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 PKDCCQ504Y2 493 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 BTBD8Q5XKL5 378 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 PMF1Q6P1K2 205 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 PKN3Q6P5Z2 889 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 ZC3H14Q6PJT7 736 aaKnown RBP24.76■■□□□ 1.55
TDP1-205ENST00000553527 ENOSF1Q7L5Y1 443 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 ASCL5Q7RTU5 278 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 SYNPOQ8N3V7 929 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 KIAA1958Q8N8K9 716 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 NAT16Q8N8M0 369 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 RNF214Q8ND24 703 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms