RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 PARVGQ9HBI0 331 aa12.1□□□□□ -0.47
SUPT16H-202ENST00000552829 ITM2CQ9NQX7 267 aa12.1□□□□□ -0.47
SUPT16H-202ENST00000552829 SPHK2Q9NRA0 654 aa12.1□□□□□ -0.47
SUPT16H-202ENST00000552829 TMEM30AQ9NV96 361 aa12.1□□□□□ -0.47
SUPT16H-202ENST00000552829 SIX4Q9UIU6 781 aa12.1□□□□□ -0.47
SUPT16H-202ENST00000552829 CDH9Q9ULB4 789 aa12.1□□□□□ -0.47
SUPT16H-202ENST00000552829 NOL7Q9UMY1 257 aaKnown RBP12.1□□□□□ -0.47
SUPT16H-202ENST00000552829 SMC3Q9UQE7 1217 aa12.1□□□□□ -0.47
SUPT16H-202ENST00000552829 PIEZO2Q9H5I5 2752 aa12.1□□□□□ -0.47
SUPT16H-202ENST00000552829 CAPN8A6NHC0 703 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 GOLGA8CPA6NN73 597 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 KCNJ18B7U540 433 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 PRRT4C9JH25 899 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 PLK4O00444 970 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 GREM1O60565 184 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 IGLV3-19P01714 112 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 MBL2P11226 248 aaPredicted RBP12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 NCAM1P13591 858 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 HLA-EP13747 358 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 PLCG1P19174 1290 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 GJB2P29033 226 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 ABCD1P33897 745 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 GRIK1P39086 918 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 TFAMQ00059 246 aaKnown RBP12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 CFHR1Q03591 330 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 MYO1EQ12965 1108 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 SDE2Q6IQ49 451 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 DPH6Q7L8W6 267 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 TMPRSS12Q86WS5 348 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 BBS7Q8IWZ6 715 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 CHPFQ8IZ52 775 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 INTS4Q96HW7 963 aaKnown RBP12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 FAM84AQ96KN4 292 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 FCRL3Q96P31 734 aaPredicted RBP12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 PLIN2Q99541 437 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 GPR174Q9BXC1 333 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 IKZF4Q9H2S9 585 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 SNX9Q9Y5X1 595 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 RAD54BQ9Y620 910 aa12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 COL5A1P20908 1838 aaPredicted RBP12.09□□□□□ -0.47
SUPT16H-202ENST00000552829 TEX51A0A1B0GUA7 166 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 A0A1B0GVT2 93 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 MEI4A8MW99 385 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 WASH3PC4AMC7 463 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 F8VP50 259 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 CAPN9O14815 690 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 TRIM66O15016 1216 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 COCHO43405 550 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 CACNG3O60359 315 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 CISD3P0C7P0 127 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 PSMC1P62191 440 aaKnown RBP12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 PKP1Q13835 747 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 MAPRE1Q15691 268 aaKnown RBP12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 ZRSR1Q15695 479 aaKnown RBP12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 DCAF12L1Q5VU92 463 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 SNX30Q5VWJ9 437 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 GRAMD4Q6IC98 578 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 DHRS13Q6UX07 377 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 BRSK2Q8IWQ3 736 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 CSGALNACT2Q8N6G5 542 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 ZSWIM2Q8NEG5 633 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 NXPE2Q96DL1 559 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 ERLEC1Q96DZ1 483 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 PCED1BQ96HM7 432 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 STRA6Q9BX79 667 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 ITGA11Q9UKX5 1188 aa12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 TP53BP1Q12888 1972 aaPredicted RBP12.08□□□□□ -0.48
SUPT16H-202ENST00000552829 PAPSS1O43252 624 aaPredicted RBP12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 PCDHGA12O60330 932 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 FAM13AO94988 1023 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 ABL1P00519 1130 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 GRK6P43250 576 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 TPMTP51580 245 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 CACNA2D1P54289 1103 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 RBP5P82980 135 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 ENPP2Q13822 863 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 RTP5Q14D33 572 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 SUZ12Q15022 739 aaKnown RBP12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 POSTNQ15063 836 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 ANO4Q32M45 955 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 FUT11Q495W5 492 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 TDRD10Q5VZ19 366 aaKnown RBP12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 KIAA1324Q6UXG2 1013 aaKnown RBP12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 LRRC69Q6ZNQ3 347 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 GPR155Q7Z3F1 870 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 GPBP1Q86WP2 473 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 LURAP1LQ8IV03 231 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 SNIP1Q8TAD8 396 aaKnown RBP12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 MYCBPAPQ8TBZ2 947 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 CACTINQ8WUQ7 758 aaKnown RBP12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 OVCA2Q8WZ82 227 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 SLITRK1Q96PX8 696 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 MKRN2Q9H000 416 aaKnown RBP12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 MIR1-1HGQ9H1L0 117 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 BLOC1S4Q9NUP1 217 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 DNAJC17Q9NVM6 304 aaKnown RBP12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 IL37Q9NZH6 218 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms