RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 ARHGEF2Q92974 986 aaKnown RBP6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 ATP6V0A1Q93050 837 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 IFT74Q96LB3 600 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 FGD4Q96M96 766 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 SCLT1Q96NL6 688 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 PSMG3-AS1Q96PY0 264 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 TAAR1Q96RJ0 339 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 MYCBPQ99417 103 aaPredicted RBP6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 PRMT1Q99873 361 aaKnown RBP6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 ELAC2Q9BQ52 826 aaKnown RBP6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 AARSD1Q9BTE6 412 aaKnown RBP6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 DCLK3Q9C098 648 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 KIAA1683Q9H0B3 1180 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 CDC42EP4Q9H3Q1 356 aaKnown RBP6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 PPCSQ9HAB8 311 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 SLC38A10Q9HBR0 1119 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 PDLIM7Q9NR12 457 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 C1orf112Q9NSG2 853 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 COL20A1Q9P218 1284 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 ASIC3Q9UHC3 531 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 LGALS13Q9UHV8 139 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 FBXL21Q9UKT6 434 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 SLC12A4Q9UP95 1085 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 USP15Q9Y4E8 981 aaPredicted RBP6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 CTDP1Q9Y5B0 961 aaPredicted RBP6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 PCDHA10Q9Y5I2 948 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 SLX4Q8IY92 1834 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 SMCHD1A6NHR9 2005 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 CNTNAP1P78357 1384 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 SCN9AQ15858 1988 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 TCRBV7S2A1N4TA0A589 114 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 CLRN2A0PK11 232 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 TISP43B9A030 160 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 NFIBO00712 420 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 CLDN3O15551 220 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 CDH16O75309 829 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 STAM2O75886 525 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 ATP5HO75947 161 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 LDHAP00338 332 aaKnown RBP6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 ABHD2P08910 425 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 KRT5P13647 590 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 EZRP15311 586 aaKnown RBP6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 IVDP26440 423 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 COL8A1P27658 744 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 CCND2P30279 289 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 ADCY8P40145 1251 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 NSFP46459 744 aaKnown RBP6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 SLC18A1P54219 525 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 RPS6P62753 249 aaKnown RBP6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 IGBP1P78318 339 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 ELF3P78545 371 aaPredicted RBP6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 NEDD9Q14511 834 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 PSMD6Q15008 389 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 GALNTL6Q49A17 601 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 LRRC38Q5VT99 294 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 ARHGEF16Q5VV41 709 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 DRICH1Q6PGQ1 229 aaPredicted RBP6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 ZNF365Q70YC5 407 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 VSIG10LQ86VR7 867 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 CCDC25Q86WR0 208 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 PHF13Q86YI8 300 aaPredicted RBP6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 TDRPQ86YL5 185 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 KATNAL2Q8IYT4 538 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 RCOR2Q8IZ40 523 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 TOP6BLQ8N6T0 577 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 EXD1Q8NHP7 514 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 IL31RAQ8NI17 732 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 TAS1R2Q8TE23 839 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 C1orf54Q8WWF1 131 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 POMGNT1Q8WZA1 660 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 CCDC127Q96BQ5 260 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 CDHR1Q96JP9 859 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 CEP170P1Q96L14 293 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 MAGEB18Q96M61 343 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 TTC25Q96NG3 672 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 RMDN3Q96TC7 470 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 PDCD2LQ9BRP1 358 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 TRIM7Q9C029 511 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 LRRC4CQ9HCJ2 640 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 GP6Q9HCN6 339 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 UBN1Q9NPG3 1134 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 GPRC5CQ9NQ84 441 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 PXMP2Q9NR77 195 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 FBXO28Q9NVF7 368 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 NKIRAS1Q9NYS0 192 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 IP6K2Q9UHH9 426 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 PGAP2Q9UHJ9 254 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 ANAPC7Q9UJX3 599 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 CNTN6Q9UQ52 1028 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 DRG1Q9Y295 367 aaKnown RBP6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 PTPN22Q9Y2R2 807 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 ARL2BPQ9Y2Y0 163 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 NEU2Q9Y3R4 380 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 ZNF451Q9Y4E5 1061 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 SCINQ9Y6U3 715 aa6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 RBBP6Q7Z6E9 1792 aaKnown RBP6.31□□□□□ -1.4
CHMP4A-210ENST00000552620 NFASCO94856 1347 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 MYPNQ86TC9 1320 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ZNF646O15015 1829 aaPredicted RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 TMEM120BA0PK00 339 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms