RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 EIF2S3P41091 472 aaKnown RBP16.24■□□□□ 0.19
CACNB3-220ENST00000551716 AFF3P51826 1226 aaKnown RBP16.24■□□□□ 0.19
CACNB3-220ENST00000551716 ST3GAL1Q11201 340 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 INAVAQ3KP66 663 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 C6orf118Q5T5N4 469 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 DCAF12L1Q5VU92 463 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 SNX30Q5VWJ9 437 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 HS2ST1Q7LGA3 356 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 MARCH9Q86YJ5 346 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 CCDC83Q8IWF9 413 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 KBTBD7Q8WVZ9 684 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 BAP1Q92560 729 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 ANKRD36BP1Q96IX9 119 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 ZFRQ96KR1 1074 aaKnown RBP16.24■□□□□ 0.19
CACNB3-220ENST00000551716 NACA2Q9H009 215 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.24■□□□□ 0.19
CACNB3-220ENST00000551716 USP36Q9P275 1121 aaKnown RBP16.24■□□□□ 0.19
CACNB3-220ENST00000551716 PTPRBP23467 1997 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 KNTC1P50748 2209 aa16.23■□□□□ 0.19
CACNB3-220ENST00000551716 ITPKBP27987 946 aa16.23■□□□□ 0.19
CACNB3-220ENST00000551716 HNF1BP35680 557 aa16.23■□□□□ 0.19
CACNB3-220ENST00000551716 GNL1P36915 607 aaPredicted RBP16.23■□□□□ 0.19
CACNB3-220ENST00000551716 TEAD4Q15561 434 aa16.23■□□□□ 0.19
CACNB3-220ENST00000551716 PTPRNQ16849 979 aa16.23■□□□□ 0.19
CACNB3-220ENST00000551716 HTR3DQ70Z44 454 aa16.23■□□□□ 0.19
CACNB3-220ENST00000551716 GPR155Q7Z3F1 870 aa16.23■□□□□ 0.19
CACNB3-220ENST00000551716 FCRL3Q96P31 734 aaPredicted RBP16.23■□□□□ 0.19
CACNB3-220ENST00000551716 BBS2Q9BXC9 721 aa16.23■□□□□ 0.19
CACNB3-220ENST00000551716 SNX25Q9H3E2 840 aa16.23■□□□□ 0.19
CACNB3-220ENST00000551716 SIX4Q9UIU6 781 aa16.23■□□□□ 0.19
CACNB3-220ENST00000551716 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.23■□□□□ 0.19
CACNB3-220ENST00000551716 RAD54BQ9Y620 910 aa16.23■□□□□ 0.19
CACNB3-220ENST00000551716 HELZP42694 1942 aaKnown RBP16.23■□□□□ 0.19
CACNB3-220ENST00000551716 PRRT4C9JH25 899 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 TRIM24O15164 1050 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 PCDHGA12O60330 932 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 TYRP14679 529 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 JUPP14923 745 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 GARTP22102 1010 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 BNC1Q01954 994 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 CFHR1Q03591 330 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 SURF1Q15526 300 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 MDH1BQ5I0G3 518 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 RAD54LQ92698 747 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 FBXO32Q969P5 355 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 ACCSQ96QU6 501 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 MMS19Q96T76 1030 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 SLC6A17Q9H1V8 727 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 CD93Q9NPY3 652 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 COMMD8Q9NX08 183 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 MARK1Q9P0L2 795 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 SEL1LQ9UBV2 794 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 CHORDC1Q9UHD1 332 aaPredicted RBP16.22■□□□□ 0.19
CACNB3-220ENST00000551716 EIF2B4Q9UI10 523 aaKnown RBP16.22■□□□□ 0.19
CACNB3-220ENST00000551716 PCDHGA1Q9Y5H4 931 aa16.22■□□□□ 0.19
CACNB3-220ENST00000551716 CFAP46Q8IYW2 2715 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 SHROOM3Q8TF72 1996 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 NEDD8-MDP1E9PL57 170 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 PLK4O00444 970 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 DFNA5O60443 496 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 SYNCRIPO60506 623 aaKnown RBP16.21■□□□□ 0.19
CACNB3-220ENST00000551716 EIF5BO60841 1220 aaKnown RBP16.21■□□□□ 0.19
CACNB3-220ENST00000551716 IGLV3-19P01714 112 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 TNNC2P02585 160 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 C1SP09871 688 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 ACADMP11310 421 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 PTPN1P18031 435 aaKnown RBP16.21■□□□□ 0.19
CACNB3-220ENST00000551716 DGKGP49619 791 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 TPMTP51580 245 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 GOLGA8FQ08AF8 430 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 GOLGA8DPQ0D2H9 430 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 IFRD2Q12894 506 aaPredicted RBP16.21■□□□□ 0.19
CACNB3-220ENST00000551716 MCM6Q14566 821 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 SF3A1Q15459 793 aaKnown RBP16.21■□□□□ 0.19
CACNB3-220ENST00000551716 DUOXA2Q1HG44 320 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 FUT11Q495W5 492 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 CCDC157Q569K6 752 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 LARP1BQ659C4 914 aaKnown RBP16.21■□□□□ 0.19
CACNB3-220ENST00000551716 TMPRSS6Q8IU80 811 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 RASSF8Q8NHQ8 419 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 C1orf216Q8TAB5 229 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 PRCCQ92733 491 aaPredicted RBP16.21■□□□□ 0.19
CACNB3-220ENST00000551716 SIPA1Q96FS4 1042 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 MTMR12Q9C0I1 747 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 OSGEPQ9NPF4 335 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 BLOC1S4Q9NUP1 217 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 INTS13Q9NVM9 706 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 BTBD3Q9Y2F9 522 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 PCDHB13Q9Y5F0 798 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 STON1Q9Y6Q2 735 aa16.21■□□□□ 0.19
CACNB3-220ENST00000551716 A0A1B0GVT2 93 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 TACC1O75410 805 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 DDIT3P35638 169 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 CSNK1EP49674 416 aaKnown RBP16.2■□□□□ 0.18
CACNB3-220ENST00000551716 WNT7BP56706 349 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 ORC1Q13415 861 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 KIF19Q2TAC6 998 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 DHRS13Q6UX07 377 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 SYCP3Q8IZU3 236 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 UCMAQ8WVF2 138 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms