RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 C12orf40Q86WS4 652 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 DDX42Q86XP3 938 aaKnown RBP eCLIP14.18□□□□□ -0.14
NUP188-211ENST00000550219 SFTPA1Q8IWL2 248 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 SCAMP5Q8TAC9 235 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 USP33Q8TEY7 942 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 LOXL4Q96JB6 756 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 TUBGCP2Q9BSJ2 902 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 NACA2Q9H009 215 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 MMRN2Q9H8L6 949 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 VRTNQ9H8Y1 702 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 RXFP3Q9NSD7 469 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 GMIPQ9P107 970 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 SH3BP1Q9Y3L3 701 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 DNAH14Q0VDD8 3507 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 EML5Q05BV3 1969 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 K7EQS6 105 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 PMM2O15305 246 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 FOXD2O60548 495 aaPredicted RBP14.17□□□□□ -0.14
NUP188-211ENST00000550219 ADH1CP00326 375 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 ADH5P11766 374 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 CDK11BP21127 795 aaKnown RBP14.17□□□□□ -0.14
NUP188-211ENST00000550219 ADORA2BP29275 332 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 GTF2H1P32780 548 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 MTIF2P46199 727 aaKnown RBP14.17□□□□□ -0.14
NUP188-211ENST00000550219 SLC6A11P48066 632 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 NDST1P52848 882 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 CREB5Q02930 508 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 MAN2A1Q16706 1144 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 PLK5Q496M5 336 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 MIIPQ5JXC2 388 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 HECTD3Q5T447 861 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 TCEAL6Q6IPX3 200 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 FUKQ8N0W3 1084 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 CCDC26Q8TAB7 109 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 SLC2A14Q8TDB8 520 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 TCEAL3Q969E4 200 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 CNTNAP3BQ96NU0 1288 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 CNTNAP3Q9BZ76 1288 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 CCSER2Q9H7U1 834 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 ZDHHC4Q9NPG8 344 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 CHORDC1Q9UHD1 332 aaPredicted RBP14.17□□□□□ -0.14
NUP188-211ENST00000550219 ATG2BQ96BY7 2078 aa14.17□□□□□ -0.14
NUP188-211ENST00000550219 HLA-DRAP01903 254 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 APODP05090 189 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 TRIM49P0CI25 452 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 TRIM49CP0CI26 452 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 TIE1P35590 1138 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 COPB1P53618 953 aaKnown RBP14.16□□□□□ -0.14
NUP188-211ENST00000550219 MAP3K7CLP57077 242 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 PPP3CAQ08209 521 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 MESP2Q0VG99 397 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 KCNH2Q12809 1159 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 ZACNQ401N2 412 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 PAQR9Q6ZVX9 377 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 SV2AQ7L0J3 742 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 ALLCQ8N6M5 410 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 ANKRD20A12PQ8NF67 263 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 OVCA2Q8WZ82 227 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 PNKPQ96T60 521 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 IMPG2Q9BZV3 1241 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 DUSP15Q9H1R2 295 aaPredicted RBP14.16□□□□□ -0.14
NUP188-211ENST00000550219 ARHGEF4Q9NR80 690 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 MMP17Q9ULZ9 603 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.16□□□□□ -0.14
NUP188-211ENST00000550219 WDR87Q6ZQQ6 2873 aa14.16□□□□□ -0.14
NUP188-211ENST00000550219 RALGAPA1Q6GYQ0 2036 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 STX10O60499 249 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 BEST1O76090 585 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 RHOBTB1O94844 696 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 KLF8O95600 359 aaPredicted RBP14.15□□□□□ -0.14
NUP188-211ENST00000550219 ADRB1P08588 477 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 ZNF806P0C7X5 589 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 PRKCSHP14314 528 aaPredicted RBP14.15□□□□□ -0.14
NUP188-211ENST00000550219 ASPAP45381 313 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 FANCCQ00597 558 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 SGSM1Q2NKQ1 1148 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 VWA3BQ502W6 1294 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 LY6G5CQ5SRR4 150 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 RHBDF2Q6PJF5 856 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 SARM1Q6SZW1 724 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 BBS7Q8IWZ6 715 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 ADGRG2Q8IZP9 1017 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 NAT16Q8N8M0 369 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 C12orf29Q8N999 325 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 TXNDC5Q8NBS9 432 aaKnown RBP14.15□□□□□ -0.14
NUP188-211ENST00000550219 ZMIZ2Q8NF64 920 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 MDGA1Q8NFP4 955 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 ZC3H10Q96K80 434 aaKnown RBP14.15□□□□□ -0.14
NUP188-211ENST00000550219 ZFRQ96KR1 1074 aaKnown RBP14.15□□□□□ -0.14
NUP188-211ENST00000550219 SMOQ99835 787 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 NDST4Q9H3R1 872 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 TMEM8AQ9HCN3 771 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 TAB2Q9NYJ8 693 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 BCCIPQ9P287 314 aaKnown RBP eCLIP14.15□□□□□ -0.14
NUP188-211ENST00000550219 TBC1D14Q9P2M4 693 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 EBF1Q9UH73 591 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 PCDHGA5Q9Y5G8 931 aa14.15□□□□□ -0.14
NUP188-211ENST00000550219 A0A1B0GTH6 734 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 E2F8A0AVK6 867 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 TNFRSF10BO14763 440 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms