RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 LCP1P13796 627 aa27.24■■□□□ 1.95
CPSF6-205ENST00000550075 CD72P21854 359 aa27.24■■□□□ 1.95
CPSF6-205ENST00000550075 CTHP32929 405 aa27.24■■□□□ 1.95
CPSF6-205ENST00000550075 ACADSBP45954 432 aa27.24■■□□□ 1.95
CPSF6-205ENST00000550075 SYCP1Q15431 976 aa27.24■■□□□ 1.95
CPSF6-205ENST00000550075 DPY19L2P1Q6NXN4 242 aa27.24■■□□□ 1.95
CPSF6-205ENST00000550075 PMF1Q6P1K2 205 aa27.24■■□□□ 1.95
CPSF6-205ENST00000550075 TTC8Q8TAM2 541 aa27.24■■□□□ 1.95
CPSF6-205ENST00000550075 IRGQQ8WZA9 623 aa27.24■■□□□ 1.95
CPSF6-205ENST00000550075 GOLGA1Q92805 767 aa27.24■■□□□ 1.95
CPSF6-205ENST00000550075 ZFRQ96KR1 1074 aaKnown RBP27.24■■□□□ 1.95
CPSF6-205ENST00000550075 NAA15Q9BXJ9 866 aaKnown RBP27.24■■□□□ 1.95
CPSF6-205ENST00000550075 STK33Q9BYT3 514 aa27.24■■□□□ 1.95
CPSF6-205ENST00000550075 GANQ9H2C0 597 aa27.24■■□□□ 1.95
CPSF6-205ENST00000550075 FAM207AQ9NSI2 230 aaPredicted RBP27.24■■□□□ 1.95
CPSF6-205ENST00000550075 OLA1Q9NTK5 396 aaKnown RBP27.24■■□□□ 1.95
CPSF6-205ENST00000550075 LSM7Q9UK45 103 aaKnown RBP27.24■■□□□ 1.95
CPSF6-205ENST00000550075 CEP83Q9Y592 693 aa27.24■■□□□ 1.95
CPSF6-205ENST00000550075 COL4A3Q01955 1670 aa27.24■■□□□ 1.95
CPSF6-205ENST00000550075 FAM170BA6NMN3 283 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 SART1O43290 800 aaKnown RBP27.23■■□□□ 1.95
CPSF6-205ENST00000550075 ATP1A3P13637 1013 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 ARSAP15289 507 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 TARSP26639 723 aaKnown RBP27.23■■□□□ 1.95
CPSF6-205ENST00000550075 ZXDBP98169 803 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 EML3Q32P44 896 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 FILIP1LQ4L180 1135 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 BTBD8Q5XKL5 378 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 DENND1BQ6P3S1 775 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 CCDC105Q8IYK2 499 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 NEK11Q8NG66 645 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 STK32AQ8WU08 396 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 OTUB2Q96DC9 234 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 ECT2Q9H8V3 914 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 ACP6Q9NPH0 428 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 ST7Q9NRC1 585 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 STRIP2Q9ULQ0 834 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 NDRG2Q9UN36 371 aaKnown RBP27.23■■□□□ 1.95
CPSF6-205ENST00000550075 PCDHGC3Q9UN70 934 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 SIK3Q9Y2K2 1263 aa27.23■■□□□ 1.95
CPSF6-205ENST00000550075 F8VZ95 297 aa27.22■■□□□ 1.95
CPSF6-205ENST00000550075 PI15O43692 258 aa27.22■■□□□ 1.95
CPSF6-205ENST00000550075 TBX18O95935 607 aa27.22■■□□□ 1.95
CPSF6-205ENST00000550075 IRF1P10914 325 aa27.22■■□□□ 1.95
CPSF6-205ENST00000550075 KRT9P35527 623 aa27.22■■□□□ 1.95
CPSF6-205ENST00000550075 GPD2P43304 727 aa27.22■■□□□ 1.95
CPSF6-205ENST00000550075 SOX9P48436 509 aa27.22■■□□□ 1.95
CPSF6-205ENST00000550075 DAOAP59103 153 aa27.22■■□□□ 1.95
CPSF6-205ENST00000550075 RNF139Q8WU17 664 aa27.22■■□□□ 1.95
CPSF6-205ENST00000550075 NOX5Q96PH1 765 aa27.22■■□□□ 1.95
CPSF6-205ENST00000550075 ERGIC2Q96RQ1 377 aa27.22■■□□□ 1.95
CPSF6-205ENST00000550075 PNMA6AP0CW24 399 aaPredicted RBP27.21■■□□□ 1.95
CPSF6-205ENST00000550075 POLR2FP61218 127 aaKnown RBP27.21■■□□□ 1.95
CPSF6-205ENST00000550075 IQCB1Q15051 598 aa27.21■■□□□ 1.95
CPSF6-205ENST00000550075 APTXQ7Z2E3 356 aaKnown RBP27.21■■□□□ 1.95
CPSF6-205ENST00000550075 SPAG5Q96R06 1193 aa27.21■■□□□ 1.95
CPSF6-205ENST00000550075 KLF16Q9BXK1 252 aaPredicted RBP27.21■■□□□ 1.95
CPSF6-205ENST00000550075 ABCC13Q9NSE7 274 aa27.21■■□□□ 1.95
CPSF6-205ENST00000550075 RASAL2Q9UJF2 1139 aa27.21■■□□□ 1.95
CPSF6-205ENST00000550075 ARIH1Q9Y4X5 557 aaPredicted RBP27.21■■□□□ 1.95
CPSF6-205ENST00000550075 MUC6Q6W4X9 2439 aa27.2■■□□□ 1.95
CPSF6-205ENST00000550075 DCNP07585 359 aaKnown RBP27.2■■□□□ 1.94
CPSF6-205ENST00000550075 CLCN1P35523 988 aa27.2■■□□□ 1.94
CPSF6-205ENST00000550075 COG7P83436 770 aa27.2■■□□□ 1.94
CPSF6-205ENST00000550075 EFEMP1Q12805 493 aa27.2■■□□□ 1.94
CPSF6-205ENST00000550075 LRRC32Q14392 662 aa27.2■■□□□ 1.94
CPSF6-205ENST00000550075 SLC47A2Q86VL8 602 aa27.2■■□□□ 1.94
CPSF6-205ENST00000550075 MIB1Q86YT6 1006 aa27.2■■□□□ 1.94
CPSF6-205ENST00000550075 DTWD2Q8NBA8 298 aa27.2■■□□□ 1.94
CPSF6-205ENST00000550075 TRIM62Q9BVG3 475 aa27.2■■□□□ 1.94
CPSF6-205ENST00000550075 PDCL3Q9H2J4 239 aa27.2■■□□□ 1.94
CPSF6-205ENST00000550075 CBX8Q9HC52 389 aa27.2■■□□□ 1.94
CPSF6-205ENST00000550075 NUDT5Q9UKK9 219 aa27.2■■□□□ 1.94
CPSF6-205ENST00000550075 GOLGA6L19H0YKK7 550 aa27.19■■□□□ 1.94
CPSF6-205ENST00000550075 MDM4O15151 490 aa27.19■■□□□ 1.94
CPSF6-205ENST00000550075 GALR2O43603 387 aaPredicted RBP27.19■■□□□ 1.94
CPSF6-205ENST00000550075 ADH1CP00326 375 aa27.19■■□□□ 1.94
CPSF6-205ENST00000550075 RPL34P49207 117 aaKnown RBP27.19■■□□□ 1.94
CPSF6-205ENST00000550075 KLK7P49862 253 aa27.19■■□□□ 1.94
CPSF6-205ENST00000550075 SNX16P57768 344 aa27.19■■□□□ 1.94
CPSF6-205ENST00000550075 PDCLQ13371 301 aa27.19■■□□□ 1.94
CPSF6-205ENST00000550075 BSPRYQ5W0U4 402 aa27.19■■□□□ 1.94
CPSF6-205ENST00000550075 BHLHA9Q7RTU4 235 aa27.19■■□□□ 1.94
CPSF6-205ENST00000550075 LHX5Q9H2C1 402 aa27.19■■□□□ 1.94
CPSF6-205ENST00000550075 LINC00597Q9H2U6 94 aa27.19■■□□□ 1.94
CPSF6-205ENST00000550075 MARCH2Q9P0N8 246 aa27.19■■□□□ 1.94
CPSF6-205ENST00000550075 SHISA7A6NL88 538 aa27.18■■□□□ 1.94
CPSF6-205ENST00000550075 YJEFN3A6XGL0 299 aa27.18■■□□□ 1.94
CPSF6-205ENST00000550075 E7ENQ6 273 aa27.18■■□□□ 1.94
CPSF6-205ENST00000550075 PIK3R2O00459 728 aa27.18■■□□□ 1.94
CPSF6-205ENST00000550075 RPS9P46781 194 aaKnown RBP27.18■■□□□ 1.94
CPSF6-205ENST00000550075 PASD1Q8IV76 773 aa27.18■■□□□ 1.94
CPSF6-205ENST00000550075 NDRG1Q92597 394 aaKnown RBP27.18■■□□□ 1.94
CPSF6-205ENST00000550075 IER2Q9BTL4 223 aa27.18■■□□□ 1.94
CPSF6-205ENST00000550075 SLC4A5Q9BY07 1137 aa27.18■■□□□ 1.94
CPSF6-205ENST00000550075 MIS12Q9H081 205 aa27.18■■□□□ 1.94
CPSF6-205ENST00000550075 NLRC4Q9NPP4 1024 aa27.18■■□□□ 1.94
CPSF6-205ENST00000550075 MTF2Q9Y483 593 aaPredicted RBP27.18■■□□□ 1.94
CPSF6-205ENST00000550075 SCAMP3O14828 347 aaKnown RBP27.17■■□□□ 1.94
CPSF6-205ENST00000550075 LTFP02788 710 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms