RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 GPD1P21695 349 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 DNAJB1P25685 340 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 PSMA2P25787 234 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 CXCR5P32302 372 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 CTNNA1P35221 906 aaKnown RBP8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 GRIK1P39086 918 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 PEX5P50542 639 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 SLC5A3P53794 718 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 SLC8A3P57103 927 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 RNASE9P60153 205 aaKnown RBP8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 PITX1P78337 314 aaPredicted RBP8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 SMAD3P84022 425 aaKnown RBP8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 SMARCB1Q12824 385 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 RPS6KA1Q15418 735 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 C15orf59Q2T9L4 293 aaPredicted RBP8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 CCDC14Q49A88 953 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 OTUD1Q5VV17 481 aaPredicted RBP8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 TXNRD3NBQ6F5E7 133 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 PM20D1Q6GTS8 502 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 KIAA1841Q6NSI8 718 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 VSTM1Q6UX27 236 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 CYP4V2Q6ZWL3 525 aaPredicted RBP8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 SCN4BQ8IWT1 228 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 SCML4Q8N228 414 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 LRRN4CLQ8ND94 238 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 SCAMP5Q8TAC9 235 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 RXFP2Q8WXD0 754 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 C8orf48Q96LL4 319 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 CFAP57Q96MR6 1250 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 C11orf84Q9BUA3 381 aaPredicted RBP8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 CNGB3Q9NQW8 809 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 SMARCAL1Q9NZC9 954 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 EHD2Q9NZN4 543 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 CALCOCO1Q9P1Z2 691 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 CDC23Q9UJX2 597 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 YBX2Q9Y2T7 364 aaKnown RBP8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 SAR1BQ9Y6B6 198 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 USP3Q9Y6I4 520 aa8.48□□□□□ -1.05
DEPDC4-207ENST00000549249 MIF4GDA9UHW6 222 aaKnown RBP8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 TNFRSF10AO00220 468 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 SPOPO43791 374 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 LRCH4O75427 683 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 ABLIM3O94929 683 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 FBXO21O94952 628 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 ZBED1O96006 694 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 FYNP06241 537 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 CA3P07451 260 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 PDGFRAP16234 1089 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 TCP1P17987 556 aaKnown RBP8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 ATF6P18850 670 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 IL1R2P27930 398 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 SLC1A1P43005 524 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 PGFP49763 221 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 ZNF143P52747 638 aaPredicted RBP8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 SNX16P57768 344 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 ERVFC1P60507 584 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 SLC25A11Q02978 314 aaKnown RBP8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 KRT17Q04695 432 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 DUSP4Q13115 394 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 RAB33AQ14088 237 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 PIGHQ14442 188 aaPredicted RBP8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 MGAT5BQ3V5L5 792 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 EFHC1Q5JVL4 640 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 SH3PXD2AQ5TCZ1 1133 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 AADACL2Q6P093 401 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 ARCQ7LC44 396 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 CREG2Q8IUH2 290 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 GPR65Q8IYL9 337 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 SIX6OS1Q8N1H7 587 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 SPPL3Q8TCT6 385 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 GPR152Q8TDT2 470 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 C2orf15Q8WU43 125 aaKnown RBP8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 POF1BQ8WVV4 589 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 SLC2A13Q96QE2 648 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 PEBP4Q96S96 227 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 CNPY3Q9BT09 278 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 DDX23Q9BUQ8 820 aaKnown RBP8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 RXFP1Q9HBX9 757 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 ALG13Q9NP73 1137 aaKnown RBP8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 ASNSD1Q9NWL6 643 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 IL37Q9NZH6 218 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 FNIP2Q9P278 1114 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 AFF4Q9UHB7 1163 aaKnown RBP8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 LZTS1Q9Y250 596 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 USTQ9Y2C2 406 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 PCDHA3Q9Y5H8 950 aa8.47□□□□□ -1.05
DEPDC4-207ENST00000549249 MYO9BQ13459 2157 aa8.46□□□□□ -1.05
DEPDC4-207ENST00000549249 CCDC66A2RUB6 948 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 KCNK3O14649 394 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 FSCN2O14926 492 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 GRM6O15303 877 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 TEX28O15482 410 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 PSTPIP1O43586 416 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 HSF2BPO75031 334 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 CSPG5O95196 566 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 LTFP02788 710 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 GLI1P08151 1106 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 CNPP09543 421 aaKnown RBP8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 ATF2P15336 505 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 GJC1P36383 396 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms