RNA–Protein interactions for RNA: ENST00000549042.1

MBD6-208, Transcript of methyl-CpG binding domain protein 6, human

TSL 4

Gene MBD6, Length 533 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD6-208	ENST00000549042	HMGB1	P09429	215 aa	Known RBP	10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	MBL2	P11226	248 aa	Predicted RBP	10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	ACAT1	P24752	427 aa	Known RBP	10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	CD27	P26842	260 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	AFM	P43652	599 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	TAF6	P49848	677 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	FOSB	P53539	338 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	USP46	P62068	366 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	FOXK1	P85037	733 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	STRN3	Q13033	797 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	IGFBP7	Q16270	282 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	ZSCAN23	Q3MJ62	389 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	ARL13B	Q3SXY8	428 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	SGO2	Q562F6	1265 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	BBS7	Q8IWZ6	715 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	BIRC7	Q96CA5	298 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	PHF12	Q96QT6	1004 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	ACE2	Q9BYF1	805 aa	Predicted RBP	10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	HAPLN2	Q9GZV7	340 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	BHMT2	Q9H2M3	363 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	PLEKHB1	Q9UF11	243 aa	Predicted RBP	10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	GTF3C4	Q9UKN8	822 aa		10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	RBM19	Q9Y4C8	960 aa	Known RBP	10.82	□□□□□ -0.68
MBD6-208	ENST00000549042	ARID1B	Q8NFD5	2236 aa	Predicted RBP	10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	NEDD8-MDP1	E9PL57	170 aa		10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	VILL	O15195	856 aa		10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	SYNCRIP	O60506	623 aa	Known RBP	10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	OAS1	P00973	400 aa	Known RBP	10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	SFTPC	P11686	197 aa		10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	ACSL1	P33121	698 aa		10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	MYL7	Q01449	175 aa		10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	ST3GAL1	Q11201	340 aa		10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	KRT32	Q14532	448 aa		10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	CFAP221	Q4G0U5	840 aa		10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	INTS6L	Q5JSJ4	861 aa	Known RBP	10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	SPATA2L	Q8IUW3	424 aa	Predicted RBP	10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	CCDC97	Q96F63	343 aa	Predicted RBP	10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	TSPAN18	Q96SJ8	248 aa		10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	WDR70	Q9NW82	654 aa		10.81	□□□□□ -0.68
MBD6-208	ENST00000549042	CACNG3	O60359	315 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	NEMF	O60524	1076 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	HIP1R	O75146	1068 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	ACP1	P24666	158 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	RPA1	P27694	616 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	EPHA8	P29322	1005 aa	Predicted RBP	10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	PDIA3	P30101	505 aa	Known RBP	10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	E2F1	Q01094	437 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	TMEM132D	Q14C87	1099 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	TSGA10IP	Q3SY00	556 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	ZPBP2	Q6X784	338 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	DAW1	Q8N136	415 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	PDCL2	Q8N4E4	241 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	XPO6	Q96QU8	1125 aa	Known RBP	10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	PKMYT1	Q99640	499 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	SEMA3C	Q99985	751 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	TRIM9	Q9C026	710 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	CCSER1	Q9C0I3	900 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	EPN3	Q9H201	632 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	GJB4	Q9NTQ9	266 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	DDX43	Q9NXZ2	648 aa	Known RBP	10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	SH3BP1	Q9Y3L3	701 aa		10.8	□□□□□ -0.68
MBD6-208	ENST00000549042	PLXNA2	O75051	1894 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	KPNA7	A9QM74	516 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	CPLX1	O14810	134 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	YKT6	O15498	198 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	TSPAN3	O60637	253 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	PPFIA2	O75334	1257 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	CS	O75390	466 aa	Known RBP	10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	SEMA4F	O95754	770 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	ITGB2	P05107	769 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	TYR	P14679	529 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	RBMS1	P29558	406 aa	Known RBP	10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	MAGEA11	P43364	429 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	DGKG	P49619	791 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	COPA	P53621	1224 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	INHBC	P55103	352 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	SKOR1	P84550	965 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	GRIN1	Q05586	938 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	CLN3	Q13286	438 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	SV2C	Q496J9	727 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	DENND5B	Q6ZUT9	1274 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	USP53	Q70EK8	1073 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	ERMN	Q8TAM6	284 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	FUBP3	Q96I24	572 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	SPATA17	Q96L03	361 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	SLC6A18	Q96N87	628 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	DEPDC7	Q96QD5	511 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	CCNL2	Q96S94	520 aa	Predicted RBP	10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	ACBD6	Q9BR61	282 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	BBS2	Q9BXC9	721 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	LRWD1	Q9UFC0	647 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	MYH10	P35580	1976 aa		10.79	□□□□□ -0.68
MBD6-208	ENST00000549042	WNT7A	O00755	349 aa		10.78	□□□□□ -0.68
MBD6-208	ENST00000549042	EFS	O43281	561 aa		10.78	□□□□□ -0.68
MBD6-208	ENST00000549042	ADRB2	P07550	413 aa		10.78	□□□□□ -0.68
MBD6-208	ENST00000549042	PPP3CC	P48454	512 aa		10.78	□□□□□ -0.68
MBD6-208	ENST00000549042	ARRB1	P49407	418 aa	Predicted RBP	10.78	□□□□□ -0.68
MBD6-208	ENST00000549042	ZNF132	P52740	706 aa		10.78	□□□□□ -0.68
MBD6-208	ENST00000549042	BCAT1	P54687	386 aa		10.78	□□□□□ -0.68
MBD6-208	ENST00000549042	RACK1	P63244	317 aa	Known RBP	10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms