RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 LY6G5CQ5SRR4 150 aa11.99□□□□□ -0.49
BEST3-209ENST00000548658 KLHL10Q6JEL2 608 aa11.99□□□□□ -0.49
BEST3-209ENST00000548658 TTI2Q6NXR4 508 aa11.99□□□□□ -0.49
BEST3-209ENST00000548658 ERMP1Q7Z2K6 904 aa11.99□□□□□ -0.49
BEST3-209ENST00000548658 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.99□□□□□ -0.49
BEST3-209ENST00000548658 USP33Q8TEY7 942 aa11.99□□□□□ -0.49
BEST3-209ENST00000548658 GAB3Q8WWW8 586 aa11.99□□□□□ -0.49
BEST3-209ENST00000548658 NELFBQ8WX92 580 aa11.99□□□□□ -0.49
BEST3-209ENST00000548658 JAKMIP2Q96AA8 810 aa11.99□□□□□ -0.49
BEST3-209ENST00000548658 LOXL4Q96JB6 756 aa11.99□□□□□ -0.49
BEST3-209ENST00000548658 KLF16Q9BXK1 252 aaPredicted RBP11.99□□□□□ -0.49
BEST3-209ENST00000548658 SPHK2Q9NRA0 654 aa11.99□□□□□ -0.49
BEST3-209ENST00000548658 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.99□□□□□ -0.49
BEST3-209ENST00000548658 C2orf42Q9NWW7 574 aa11.99□□□□□ -0.49
BEST3-209ENST00000548658 DEC1Q9P2X7 70 aa11.99□□□□□ -0.49
BEST3-209ENST00000548658 NAGPAQ9UK23 515 aa11.99□□□□□ -0.49
BEST3-209ENST00000548658 ZNF510Q9Y2H8 683 aa11.99□□□□□ -0.49
BEST3-209ENST00000548658 K7EQS6 105 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 AXIN1O15169 862 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 CYP26A1O43174 497 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 HOXC11O43248 304 aaPredicted RBP11.98□□□□□ -0.49
BEST3-209ENST00000548658 RPP40O75818 363 aaKnown RBP11.98□□□□□ -0.49
BEST3-209ENST00000548658 CCDC192P0DO97 292 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 VDRP11473 427 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 TNFRSF4P43489 277 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 BCAT1P54687 386 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 DMWDQ09019 674 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 PAK1Q13153 545 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 DMC1Q14565 340 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 PUM1Q14671 1186 aaKnown RBP eCLIP11.98□□□□□ -0.49
BEST3-209ENST00000548658 GAB4Q2WGN9 574 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 ANO4Q32M45 955 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 C2orf27AQ580R0 203 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 C10orf120Q5SQS8 335 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 NAIF1Q69YI7 327 aaPredicted RBP11.98□□□□□ -0.49
BEST3-209ENST00000548658 PKN3Q6P5Z2 889 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 GPRIN1Q7Z2K8 1008 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 CACNA2D4Q7Z3S7 1137 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 PIGZQ86VD9 579 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 C11orf74Q86VG3 221 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 BBS7Q8IWZ6 715 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 EZH1Q92800 747 aaPredicted RBP11.98□□□□□ -0.49
BEST3-209ENST00000548658 NT5C1BQ96P26 610 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 XPO6Q96QU8 1125 aaKnown RBP11.98□□□□□ -0.49
BEST3-209ENST00000548658 ARID3AQ99856 593 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 ARHGEF4Q9NR80 690 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 CHMP5Q9NZZ3 219 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 WDR35Q9P2L0 1181 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 ATG2BQ96BY7 2078 aa11.98□□□□□ -0.49
BEST3-209ENST00000548658 A0A1W2PQH9 124 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 TBC1D3BA6NDS4 549 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 SCAMP3O14828 347 aaKnown RBP11.97□□□□□ -0.49
BEST3-209ENST00000548658 XPO1O14980 1071 aaKnown RBP11.97□□□□□ -0.49
BEST3-209ENST00000548658 GADD45BO75293 160 aaPredicted RBP11.97□□□□□ -0.49
BEST3-209ENST00000548658 ALDH1A2O94788 518 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 TBX18O95935 607 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 PAEPP09466 180 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 IRF1P10914 325 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 CD19P15391 556 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 BMP6P22004 513 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 CHKAP35790 457 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 PGFP49763 221 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 DGKEP52429 567 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 MARSP56192 900 aaKnown RBP11.97□□□□□ -0.49
BEST3-209ENST00000548658 STILQ15468 1287 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 LPAL2Q16609 132 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 RAB41Q5JT25 222 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 EOGTQ5NDL2 527 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 TRMT11Q7Z4G4 463 aaKnown RBP11.97□□□□□ -0.49
BEST3-209ENST00000548658 TSTD1Q8NFU3 115 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 DCLK3Q9C098 648 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 NMUR1Q9HB89 426 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 LRRC4Q9HBW1 653 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 OSER1Q9NX31 292 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 KIAA1468Q9P260 1216 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 TSPAN16Q9UKR8 245 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 STRIP2Q9ULQ0 834 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 MMP17Q9ULZ9 603 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 USP18Q9UMW8 372 aa11.97□□□□□ -0.49
BEST3-209ENST00000548658 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.97□□□□□ -0.49
BEST3-209ENST00000548658 GPR179Q6PRD1 2367 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 BIN1O00499 593 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 ZBED1O96006 694 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 SETSIPP0DME0 302 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 SLC6A11P48066 632 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 PXNP49023 591 aaPredicted RBP11.96□□□□□ -0.49
BEST3-209ENST00000548658 TKTL1P51854 596 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 GCNT1Q02742 428 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 BST2Q10589 180 aaKnown RBP11.96□□□□□ -0.49
BEST3-209ENST00000548658 KCNH2Q12809 1159 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 LRMPQ12912 555 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 CRY1Q16526 586 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 CSRP2Q16527 193 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 USP39Q53GS9 565 aaKnown RBP11.96□□□□□ -0.49
BEST3-209ENST00000548658 PM20D1Q6GTS8 502 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 TMEM270Q6UE05 265 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 RSRC2Q7L4I2 434 aaKnown RBP11.96□□□□□ -0.49
BEST3-209ENST00000548658 SCD5Q86SK9 330 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 TMEM25Q86YD3 366 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 TRIM59Q8IWR1 403 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms