RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 PHACTR2O75167 634 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 AP1G2O75843 785 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 VNN1O95497 513 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 FAM163BP0C2L3 166 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 NDUFV2P19404 249 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 TUBP50607 506 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 BIRC3Q13489 604 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 BTBD8Q5XKL5 378 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 CNNM4Q6P4Q7 775 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 GPRIN1Q7Z2K8 1008 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 ACOT1Q86TX2 421 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 SYAP1Q96A49 352 aaPredicted RBP17.43■□□□□ 0.38
SSH1-208ENST00000548522 OTUB2Q96DC9 234 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 SMARCD1Q96GM5 515 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 SLC32A1Q9H598 525 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 SLC39A2Q9NP94 309 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 DNAJC17Q9NVM6 304 aaKnown RBP17.43■□□□□ 0.38
SSH1-208ENST00000548522 TFIP11Q9UBB9 837 aaKnown RBP17.43■□□□□ 0.38
SSH1-208ENST00000548522 CYP8B1Q9UNU6 501 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 RAD54BQ9Y620 910 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 PRRT4C9JH25 899 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 NEDD8-MDP1E9PL57 170 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 SPTLC2O15270 562 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 AP5Z1O43299 807 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 TLR5O60602 858 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 NTSR1P30989 418 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 ATICP31939 592 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 ZNF33AQ06730 810 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 NCOA4Q13772 614 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 COL9A2Q14055 689 aaPredicted RBP17.42■□□□□ 0.38
SSH1-208ENST00000548522 BMT2Q1RMZ1 405 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 SPDYCQ5MJ68 293 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 GRAMD4Q6IC98 578 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 UNC13DQ70J99 1090 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 MINDY1Q8N5J2 469 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 SLC2A14Q8TDB8 520 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 HSPA12BQ96MM6 686 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 C7orf25Q9BPX7 421 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 LRRC27Q9C0I9 530 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 NACA2Q9H009 215 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 CUEDC2Q9H467 287 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 VRTNQ9H8Y1 702 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 FAM49BQ9NUQ9 324 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 OSER1Q9NX31 292 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 SLC6A14Q9UN76 642 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 NEUROG3Q9Y4Z2 214 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 ATP8B3O60423 1300 aa17.42■□□□□ 0.38
SSH1-208ENST00000548522 ANKRD11Q6UB99 2663 aaPredicted RBP17.41■□□□□ 0.38
SSH1-208ENST00000548522 TMEM8BA6NDV4 472 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 MDM4O15151 490 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 CYP26A1O43174 497 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 STX6O43752 255 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 EXOC3O60645 756 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 SERPINF2P08697 491 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 HOXD12P35452 270 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 ATXN3P54252 364 aaPredicted RBP17.41■□□□□ 0.38
SSH1-208ENST00000548522 MAP3K7CLP57077 242 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 DLG4P78352 724 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 GFPT1Q06210 699 aaPredicted RBP17.41■□□□□ 0.38
SSH1-208ENST00000548522 BYSLQ13895 437 aaKnown RBP17.41■□□□□ 0.38
SSH1-208ENST00000548522 DUOXA1Q1HG43 343 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 ZNF667Q5HYK9 610 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 TPGS1Q6ZTW0 290 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 TRMT11Q7Z4G4 463 aaKnown RBP17.41■□□□□ 0.38
SSH1-208ENST00000548522 C12orf56Q8IXR9 622 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 GRAMD1CQ8IYS0 662 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 CHPFQ8IZ52 775 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 C12orf29Q8N999 325 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 BHMTQ93088 406 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 JAKMIP2Q96AA8 810 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 CAMK1GQ96NX5 476 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 DUSP9Q99956 384 aaKnown RBP17.41■□□□□ 0.38
SSH1-208ENST00000548522 CACNA2D2Q9NY47 1150 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 STARD13Q9Y3M8 1113 aa17.41■□□□□ 0.38
SSH1-208ENST00000548522 MYO18AQ92614 2054 aaKnown RBP17.4■□□□□ 0.38
SSH1-208ENST00000548522 CACNG3O60359 315 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 PPP6R2O75170 966 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 C4BPAP04003 597 aaKnown RBP17.4■□□□□ 0.38
SSH1-208ENST00000548522 CD59P13987 128 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 TYRP14679 529 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 AMPD3Q01432 767 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 CUL4BQ13620 913 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 SPOPLQ6IQ16 392 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 HDDC3Q8N4P3 179 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 CHCHD4Q8N4Q1 142 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 TRIML1Q8N9V2 468 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 IQUBQ8NA54 791 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 KCNV2Q8TDN2 545 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 PARD3BQ8TEW8 1205 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 IPO4Q8TEX9 1081 aaKnown RBP17.4■□□□□ 0.38
SSH1-208ENST00000548522 TNIP3Q96KP6 325 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 BBS2Q9BXC9 721 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 KLF16Q9BXK1 252 aaPredicted RBP17.4■□□□□ 0.38
SSH1-208ENST00000548522 ZSCAN16Q9H4T2 348 aaPredicted RBP17.4■□□□□ 0.38
SSH1-208ENST00000548522 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.4■□□□□ 0.384e-7■■■■■ 57.7
SSH1-208ENST00000548522 NUDT5Q9UKK9 219 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 MSRB2Q9Y3D2 182 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 ADAMTS9Q9P2N4 1935 aa17.4■□□□□ 0.38
SSH1-208ENST00000548522 PI4KAP42356 2102 aa17.39■□□□□ 0.38
SSH1-208ENST00000548522 UPK3BL1B0FP48 263 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms