RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 MYO9BQ13459 2157 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 GRID2IPA4D2P6 1211 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 NCK2O43639 380 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 GJB6O95452 261 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 NCAM1P13591 858 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 HMGA1P17096 107 aaKnown RBP16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 FLT3P36888 993 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 MTMR3Q13615 1198 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 TAF5Q15542 800 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 SLC25A52Q3SY17 297 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 DCAF6Q58WW2 860 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 SNX30Q5VWJ9 437 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 BHLHA9Q7RTU4 235 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 PEX26Q7Z412 305 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 DEFB106AQ8N104 65 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 ZNF276Q8N554 614 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 EMC1Q8N766 993 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 RNF139Q8WU17 664 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 C16orf45Q96MC5 204 aaPredicted RBP16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 IRX2Q9BZI1 471 aaPredicted RBP16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 GMIPQ9P107 970 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 AMFRQ9UKV5 643 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 ALG6Q9Y672 507 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 ATG2AQ2TAZ0 1938 aa16.56■□□□□ 0.24
TRAFD1-203ENST00000547063 MYO7AQ13402 2215 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 A0A1W2PQH9 124 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 TMEM110-MUSTN1A8MSY1 372 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 MIF4GDA9UHW6 222 aaKnown RBP16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 SPOPO43791 374 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 F9P00740 461 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 ZDHHC11BP0C7U3 371 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 PTPN2P17706 415 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 POU3F3P20264 500 aaPredicted RBP16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 CDC25CP30307 473 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 GBP1P32455 592 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 HFE2Q6ZVN8 426 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 RSRC2Q7L4I2 434 aaKnown RBP16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 STRADAQ7RTN6 431 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 SCD5Q86SK9 330 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 EFHBQ8N7U6 833 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 NDRG1Q92597 394 aaKnown RBP16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 GCNAQ96QF7 691 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 PRDM12Q9H4Q4 367 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 SFXN1Q9H9B4 322 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 ASAH2Q9NR71 780 aa16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.55■□□□□ 0.24
TRAFD1-203ENST00000547063 TRIOBPQ9H2D6 2365 aa16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 PCK1P35558 622 aa16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 TUBP50607 506 aa16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 HADHQ16836 314 aaKnown RBP16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 CCDC14Q49A88 953 aa16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 TMEM184AQ6ZMB5 413 aa16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 SND1Q7KZF4 910 aaKnown RBP eCLIP16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 SLC35F6Q8N357 371 aa16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 CMASQ8NFW8 434 aaPredicted RBP16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 NT5C3BQ969T7 300 aa16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 BTBD6Q96KE9 485 aa16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 CFAP57Q96MR6 1250 aa16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 NPY6RQ99463 290 aa16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 GAS2L1Q99501 681 aaPredicted RBP16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 PRKD2Q9BZL6 878 aa16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 TRIM7Q9C029 511 aa16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 TTYH1Q9H313 450 aaPredicted RBP16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 NAALADL1Q9UQQ1 740 aa16.54■□□□□ 0.24
TRAFD1-203ENST00000547063 CCDC66A2RUB6 948 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 CTAGE9A4FU28 777 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 CCL16O15467 120 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 PAPLNO95428 1278 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 FYNP06241 537 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 RARGP13631 454 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 TNNT1P13805 278 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 PFKLP17858 780 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 COMTP21964 271 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 CASQ1P31415 396 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 SULT1E1P49888 294 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 KPNA1P52294 538 aaPredicted RBP16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 OGDHQ02218 1023 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 KCNC3Q14003 757 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 TCEAL5Q5H9L2 206 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 HECTD3Q5T447 861 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 GPR153Q6NV75 609 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 MSANTD2Q6P1R3 559 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 KLHDC10Q6PID8 442 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 NT5DC3Q86UY8 548 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 UBL4BQ8N7F7 174 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 EDEM1Q92611 657 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 CENPIQ92674 756 aaPredicted RBP16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 PGAP3Q96FM1 320 aaPredicted RBP16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 SERPINB11Q96P15 392 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 NAPGQ99747 312 aaPredicted RBP16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 SMOC2Q9H3U7 446 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 IGFLR1Q9H665 355 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 NMUR1Q9HB89 426 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 ZMYM5Q9UJ78 669 aa16.53■□□□□ 0.24
TRAFD1-203ENST00000547063 CCDC195A0A1B0GUA6 201 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 ZNF840PA6NDX5 716 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 SOBPA7XYQ1 873 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 M0QYT0 321 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 ZNF197O14709 1029 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms