RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 MFSD6LQ8IWD5 586 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 YAF2Q8IY57 180 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 NDRG1Q92597 394 aaKnown RBP14.43□□□□□ -0.1
PTCH1-213ENST00000546820 FAM149B1Q96BN6 582 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 PCDHB18PQ96TA0 734 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 DNAJC7Q99615 494 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 CCSER2Q9H7U1 834 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 ABHD10Q9NUJ1 306 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 ASNSD1Q9NWL6 643 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 ADAM22Q9P0K1 906 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 WDR35Q9P2L0 1181 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 IMPACTQ9P2X3 320 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 ARHGAP26Q9UNA1 814 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 NUMBLQ9Y6R0 609 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 PATJQ8NI35 1801 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 HEPACAM2A8MVW5 462 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 OLFM2O95897 454 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 ERBB2P04626 1255 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 NCAM1P13591 858 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 MMP8P22894 467 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 VIPR2P41587 438 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 COG7P83436 770 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 CENPCQ03188 943 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 TDGQ13569 410 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 E4F1Q66K89 784 aaPredicted RBP14.42□□□□□ -0.1
PTCH1-213ENST00000546820 HGSNATQ68CP4 663 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 PHF13Q86YI8 300 aaPredicted RBP14.42□□□□□ -0.1
PTCH1-213ENST00000546820 RNF135Q8IUD6 432 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 SLC44A3Q8N4M1 653 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 SLC30A5Q8TAD4 765 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 DEPDC1BQ8WUY9 529 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 FGF14Q92915 247 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 USP13Q92995 863 aaPredicted RBP14.42□□□□□ -0.1
PTCH1-213ENST00000546820 VCPIP1Q96JH7 1222 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 GRPEL1Q9HAV7 217 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 POPDC2Q9HBU9 364 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 OSER1Q9NX31 292 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 DENND4CQ5VZ89 1909 aa14.42□□□□□ -0.1
PTCH1-213ENST00000546820 HSF2BPO75031 334 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 RTN2O75298 545 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 TBX18O95935 607 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 PSMC3P17980 439 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 SCNN1AP37088 669 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 PGFP49763 221 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 KPNA1P52294 538 aaPredicted RBP14.41□□□□□ -0.1
PTCH1-213ENST00000546820 CDK17Q00537 523 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 C1QBPQ07021 282 aaKnown RBP14.41□□□□□ -0.1
PTCH1-213ENST00000546820 CC2D1AQ6P1N0 951 aaPredicted RBP14.41□□□□□ -0.1
PTCH1-213ENST00000546820 POTEHQ6S545 545 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 MMS22LQ6ZRQ5 1243 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 FAM183BPQ6ZVS7 135 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 BHLHA9Q7RTU4 235 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 KIAA1958Q8N8K9 716 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 BPIFB1Q8TDL5 484 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 SH3RF2Q8TEC5 729 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 CLEC4CQ8WTT0 213 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 EDEM1Q92611 657 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 SLC22A12Q96S37 553 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 KXD1Q9BQD3 176 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 SYT11Q9BT88 431 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 TRMT61BQ9BVS5 477 aaKnown RBP14.41□□□□□ -0.1
PTCH1-213ENST00000546820 SMG9Q9H0W8 520 aaKnown RBP14.41□□□□□ -0.1
PTCH1-213ENST00000546820 DEF6Q9H4E7 631 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 TMEM51Q9NW97 253 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 MARCH2Q9P0N8 246 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 ADAMTS1Q9UHI8 967 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 SORCS3Q9UPU3 1222 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 CPQQ9Y646 472 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 DOCK8Q8NF50 2099 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 ANAPC1Q9H1A4 1944 aa14.41□□□□□ -0.1
PTCH1-213ENST00000546820 SSU72P8A0A1W2PR75 194 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 TMCO5BA8MYB1 307 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 DDX3XO00571 662 aaKnown RBP eCLIP14.4□□□□□ -0.1
PTCH1-213ENST00000546820 ZNF263O14978 683 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 FTLP02792 175 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-213ENST00000546820 ASGR2P07307 311 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 TCF3P15923 654 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 FCARP24071 287 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 EFEMP1Q12805 493 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 ARHGAP29Q52LW3 1261 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 FAM102AQ5T9C2 384 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-213ENST00000546820 WDR59Q6PJI9 974 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 SLC26A9Q7LBE3 791 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 XYLT1Q86Y38 959 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 TTC16Q8NEE8 873 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 RSAD2Q8WXG1 361 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 ANP32BQ92688 251 aaKnown RBP14.4□□□□□ -0.1
PTCH1-213ENST00000546820 TRIM11Q96F44 468 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 CCDC42Q96M95 316 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 NECAB3Q96P71 396 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-213ENST00000546820 C11orf70Q9BRQ4 267 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 SMPD4Q9NXE4 827 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 RRN3Q9NYV6 651 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 ARHGAP20Q9P2F6 1191 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 TJP2Q9UDY2 1190 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 RASAL2Q9UJF2 1139 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 NUDT5Q9UKK9 219 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 SH3BP1Q9Y3L3 701 aa14.4□□□□□ -0.1
PTCH1-213ENST00000546820 XIRP2A4UGR9 3374 aa14.39□□□□□ -0.11
PTCH1-213ENST00000546820 ANKRD62A6NC57 917 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms