RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 GOLGA7BQ2TAP0 167 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 GPR158Q5T848 1215 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 PPP1R26Q5T8A7 1209 aaPredicted RBP10.02□□□□□ -0.81
CIT-216ENST00000544872 RNF43Q68DV7 783 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 PPP1R2P3Q6NXS1 205 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 CC2D1AQ6P1N0 951 aaPredicted RBP10.02□□□□□ -0.81
CIT-216ENST00000544872 LCLAT1Q6UWP7 414 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 ARHGEF19Q8IW93 802 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 FUKQ8N0W3 1084 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 RNF214Q8ND24 703 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 FGF13Q92913 245 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 EXOC4Q96A65 974 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 MCRS1Q96EZ8 462 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 MYRFLQ96LU7 910 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 ERGIC2Q96RQ1 377 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 PKMYT1Q99640 499 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 LPIN3Q9BQK8 851 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 EDEM3Q9BZQ6 932 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 TASP1Q9H6P5 420 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 TRPC7Q9HCX4 862 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 RTN4Q9NQC3 1192 aaKnown RBP10.02□□□□□ -0.81
CIT-216ENST00000544872 ZNHIT6Q9NWK9 470 aaKnown RBP10.02□□□□□ -0.81
CIT-216ENST00000544872 EPS15L1Q9UBC2 864 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 TSPAN16Q9UKR8 245 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 MSRB2Q9Y3D2 182 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 KIAA1671Q9BY89 1806 aa10.02□□□□□ -0.81
CIT-216ENST00000544872 M0QYV0 167 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 XPO1O14980 1071 aaKnown RBP10.01□□□□□ -0.81
CIT-216ENST00000544872 HCRTO43612 131 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 C1QL1O75973 258 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 FBXO21O94952 628 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 CKMP06732 381 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 USP17L7P0C7H9 530 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 ATP1A3P13637 1013 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 DESP17661 470 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 ATF6P18850 670 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 SLC5A3P53794 718 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 EPHA5P54756 1037 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 NTHL1P78549 312 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 PFKPQ01813 784 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 SRSF1Q07955 248 aaKnown RBP eCLIP10.01□□□□□ -0.81
CIT-216ENST00000544872 MEA1Q16626 185 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 SH3PXD2AQ5TCZ1 1133 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 CEP68Q76N32 757 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 RSRC2Q7L4I2 434 aaKnown RBP10.01□□□□□ -0.81
CIT-216ENST00000544872 VPS36Q86VN1 386 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 MON1AQ86VX9 555 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 DDX42Q86XP3 938 aaKnown RBP eCLIP10.01□□□□□ -0.81
CIT-216ENST00000544872 ZNF677Q86XU0 584 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 TMEM35BQ8NCS4 154 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 WHAMMQ8TF30 809 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 RNF139Q8WU17 664 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 SHC3Q92529 594 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 SMARCD2Q92925 531 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 HSFY1Q96LI6 401 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 UBL7Q96S82 380 aaPredicted RBP10.01□□□□□ -0.81
CIT-216ENST00000544872 KCNK16Q96T55 309 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 CSNK1G1Q9HCP0 422 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 ST7Q9NRC1 585 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 HCFC1R1Q9NWW0 138 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 HMGXB4Q9UGU5 601 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 MYO6Q9UM54 1294 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 CNTN6Q9UQ52 1028 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 MTF2Q9Y483 593 aaPredicted RBP10.01□□□□□ -0.81
CIT-216ENST00000544872 TENM4Q6N022 2769 aa10.01□□□□□ -0.81
CIT-216ENST00000544872 TICRRQ7Z2Z1 1910 aa10□□□□□ -0.81
CIT-216ENST00000544872 A0A1B0GTH6 734 aa10□□□□□ -0.81
CIT-216ENST00000544872 GOLGA6L6A8MZA4 724 aa10□□□□□ -0.81
CIT-216ENST00000544872 FOXN3O00409 490 aaPredicted RBP10□□□□□ -0.81
CIT-216ENST00000544872 AXIN1O15169 862 aa10□□□□□ -0.81
CIT-216ENST00000544872 NCAM2O15394 837 aa10□□□□□ -0.81
CIT-216ENST00000544872 CYP26A1O43174 497 aa10□□□□□ -0.81
CIT-216ENST00000544872 FERP16591 822 aa10□□□□□ -0.81
CIT-216ENST00000544872 HDCP19113 662 aa10□□□□□ -0.81
CIT-216ENST00000544872 SOX5P35711 763 aa10□□□□□ -0.81
CIT-216ENST00000544872 AMPD2Q01433 879 aa10□□□□□ -0.81
CIT-216ENST00000544872 KCNC4Q03721 635 aa10□□□□□ -0.81
CIT-216ENST00000544872 TAF10Q12962 218 aa10□□□□□ -0.81
CIT-216ENST00000544872 TRIM14Q14142 442 aa10□□□□□ -0.81
CIT-216ENST00000544872 TEAD2Q15562 447 aa10□□□□□ -0.81
CIT-216ENST00000544872 HECTD3Q5T447 861 aa10□□□□□ -0.81
CIT-216ENST00000544872 SDHAF4Q5VUM1 108 aa10□□□□□ -0.81
CIT-216ENST00000544872 FAM71AQ8IYT1 594 aa10□□□□□ -0.81
CIT-216ENST00000544872 HS6ST3Q8IZP7 471 aa10□□□□□ -0.81
CIT-216ENST00000544872 TTC9BQ8N6N2 239 aa10□□□□□ -0.81
CIT-216ENST00000544872 ITFG1Q8TB96 612 aa10□□□□□ -0.81
CIT-216ENST00000544872 ZSCAN18Q8TBC5 510 aaPredicted RBP10□□□□□ -0.81
CIT-216ENST00000544872 IPO4Q8TEX9 1081 aaKnown RBP10□□□□□ -0.81
CIT-216ENST00000544872 STK32AQ8WU08 396 aa10□□□□□ -0.81
CIT-216ENST00000544872 ZNF606Q8WXB4 792 aa10□□□□□ -0.81
CIT-216ENST00000544872 ING5Q8WYH8 240 aa10□□□□□ -0.81
CIT-216ENST00000544872 KREMEN1Q96MU8 473 aa10□□□□□ -0.81
CIT-216ENST00000544872 TWNKQ96RR1 684 aa10□□□□□ -0.81
CIT-216ENST00000544872 TRIM5Q9C035 493 aa10□□□□□ -0.81
CIT-216ENST00000544872 CRISPLD1Q9H336 500 aa10□□□□□ -0.81
CIT-216ENST00000544872 KIF9Q9HAQ2 790 aa10□□□□□ -0.81
CIT-216ENST00000544872 NLRC4Q9NPP4 1024 aa10□□□□□ -0.81
CIT-216ENST00000544872 PRMT8Q9NR22 394 aaPredicted RBP10□□□□□ -0.81
CIT-216ENST00000544872 TMEM51Q9NW97 253 aa10□□□□□ -0.81
CIT-216ENST00000544872 IFNKQ9P0W0 207 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms