RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 DUSP16Q9BY84 665 aa10.54□□□□□ -0.72
MDH1-216ENST00000544381 CYLDQ9NQC7 956 aa10.54□□□□□ -0.72
MDH1-216ENST00000544381 METTL5Q9NRN9 209 aaKnown RBP10.54□□□□□ -0.72
MDH1-216ENST00000544381 SMARCAL1Q9NZC9 954 aa10.54□□□□□ -0.72
MDH1-216ENST00000544381 EHD2Q9NZN4 543 aa10.54□□□□□ -0.72
MDH1-216ENST00000544381 TJP2Q9UDY2 1190 aa10.54□□□□□ -0.72
MDH1-216ENST00000544381 PRG3Q9Y2Y8 225 aaPredicted RBP10.54□□□□□ -0.72
MDH1-216ENST00000544381 TTC3P53804 2025 aa10.54□□□□□ -0.72
MDH1-216ENST00000544381 COL4A6Q14031 1691 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 LINC01553A4QN01 128 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 TULP2O00295 520 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 CLDN5O00501 218 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 XPO1O14980 1071 aaKnown RBP10.53□□□□□ -0.72
MDH1-216ENST00000544381 PSTPIP1O43586 416 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 B4GALT3O60512 393 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 BAIAP3O94812 1187 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 ITGB1P05556 798 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 FAM200BP0CF97 657 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 IL9P15248 144 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 DESP17661 470 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 PSMA2P25787 234 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 TKTP29401 623 aaKnown RBP10.53□□□□□ -0.72
MDH1-216ENST00000544381 RFC1P35251 1148 aaPredicted RBP10.53□□□□□ -0.72
MDH1-216ENST00000544381 PLA2G4AP47712 749 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 GATMP50440 423 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 PEX5P50542 639 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 TSPY1Q01534 308 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 SLC6A3Q01959 620 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 PLCB3Q01970 1234 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 ZNF211Q13398 564 aaPredicted RBP10.53□□□□□ -0.72
MDH1-216ENST00000544381 MAPRE1Q15691 268 aaKnown RBP10.53□□□□□ -0.72
MDH1-216ENST00000544381 LONRF2Q1L5Z9 754 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 KIAA0319Q5VV43 1072 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 CC2D1AQ6P1N0 951 aaPredicted RBP10.53□□□□□ -0.72
MDH1-216ENST00000544381 FAM183BPQ6ZVS7 135 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 TMEM110Q86TL2 294 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 CPNE8Q86YQ8 564 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 LINC00528Q8N1L1 170 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 RASGEF1CQ8N431 466 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 MYCBPAPQ8TBZ2 947 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 FNIP1Q8TF40 1166 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 ALG3Q92685 438 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 HSFY1Q96LI6 401 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 B3GNT5Q9BYG0 378 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 NRDE2Q9H7Z3 1164 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 UBE2ZQ9H832 354 aaPredicted RBP10.53□□□□□ -0.72
MDH1-216ENST00000544381 CRTAC1Q9NQ79 661 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 KRT82Q9NSB4 513 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 DNAJB4Q9UDY4 337 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 TTC7AQ9ULT0 858 aaPredicted RBP10.53□□□□□ -0.72
MDH1-216ENST00000544381 FAN1Q9Y2M0 1017 aa10.53□□□□□ -0.72
MDH1-216ENST00000544381 ABHD14A-ACY1A0A1B0GW23 586 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 MYBPHLA2RUH7 354 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 F8W810 466 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 KRIT1O00522 736 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 NRP1O14786 923 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 RNF8O76064 485 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 FGGP02679 453 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 RHOXF2BP0C7M4 288 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 LCP1P13796 627 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 NPR3P17342 541 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 GPD1P21695 349 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 GJC1P36383 396 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 CETN2P41208 172 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 MARCKSL1P49006 195 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 ERVK-21P61565 698 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 OGDHQ02218 1023 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 YWHAHQ04917 246 aaPredicted RBP10.52□□□□□ -0.73
MDH1-216ENST00000544381 ACAP1Q15027 740 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 ODF2Q5BJF6 829 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 INTS6LQ5JSJ4 861 aaKnown RBP10.52□□□□□ -0.73
MDH1-216ENST00000544381 ZFYVE27Q5T4F4 411 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 DCAF12L1Q5VU92 463 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.52□□□□□ -0.731e-7■■■■□ 23.6
MDH1-216ENST00000544381 ALYREFQ86V81 257 aaKnown RBP10.52□□□□□ -0.73
MDH1-216ENST00000544381 PIGZQ86VD9 579 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 LRRC43Q8N309 656 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 MMGT1Q8N4V1 131 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 NIPA2Q8N8Q9 360 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 NOA1Q8NC60 698 aaKnown RBP10.52□□□□□ -0.73
MDH1-216ENST00000544381 JOSD2Q8TAC2 188 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 SMARCD1Q96GM5 515 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 PCED1BQ96HM7 432 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 RHOXF2Q9BQY4 288 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 TMEM175Q9BSA9 504 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 LRRC4Q9HBW1 653 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 ASNSD1Q9NWL6 643 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 LMCD1Q9NZU5 365 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 ADAM28Q9UKQ2 775 aa10.52□□□□□ -0.73
MDH1-216ENST00000544381 GOLGA6L10A0A0M3HER8 536 aa10.51□□□□□ -0.73
MDH1-216ENST00000544381 PRR33A8MZF0 331 aa10.51□□□□□ -0.73
MDH1-216ENST00000544381 F8VP50 259 aa10.51□□□□□ -0.73
MDH1-216ENST00000544381 CCDC188H7C350 402 aa10.51□□□□□ -0.73
MDH1-216ENST00000544381 SYN3O14994 580 aa10.51□□□□□ -0.73
MDH1-216ENST00000544381 PAPSS1O43252 624 aaPredicted RBP10.51□□□□□ -0.73
MDH1-216ENST00000544381 EFCAB14O75071 495 aa10.51□□□□□ -0.73
MDH1-216ENST00000544381 GJB5O95377 273 aa10.51□□□□□ -0.73
MDH1-216ENST00000544381 AMHP03971 560 aa10.51□□□□□ -0.73
MDH1-216ENST00000544381 PYGMP11217 842 aa10.51□□□□□ -0.73
MDH1-216ENST00000544381 PDGFRAP16234 1089 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms