RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 BCAT1P54687 386 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 NRLP54845 237 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 YWHAZP63104 245 aaKnown RBP18.43■□□□□ 0.54
SCARB1-208ENST00000544327 ZNF200P98182 395 aaPredicted RBP18.43■□□□□ 0.54
SCARB1-208ENST00000544327 SLC18A2Q05940 514 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 BST2Q10589 180 aaKnown RBP18.43■□□□□ 0.54
SCARB1-208ENST00000544327 CA9Q16790 459 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 XKR4Q5GH76 650 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 SPDYAQ5MJ70 313 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 SCYL2Q6P3W7 929 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 ZNF276Q8N554 614 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 TAB3Q8N5C8 712 aaPredicted RBP18.43■□□□□ 0.54
SCARB1-208ENST00000544327 ANKRD52Q8NB46 1076 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 ZNF398Q8TD17 642 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 BRI3BPQ8WY22 251 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 SPOCK2Q92563 424 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 ZNF75CPQ92670 426 aaPredicted RBP18.43■□□□□ 0.54
SCARB1-208ENST00000544327 C18orf25Q96B23 403 aaPredicted RBP18.43■□□□□ 0.54
SCARB1-208ENST00000544327 MRRFQ96E11 262 aaKnown RBP18.43■□□□□ 0.54
SCARB1-208ENST00000544327 VPS11Q9H270 941 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 ARHGEF3Q9NR81 526 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 GPATCH2LQ9NWQ4 482 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 GDAP2Q9NXN4 497 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 GGT7Q9UJ14 662 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 ATP6V1G2O95670 118 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 F2P00734 622 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 RBL1P28749 1068 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 SH2D5Q6ZV89 423 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 SCUBE3Q8IX30 993 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 OR6B3Q8NGW1 331 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 C10orf82Q8WW14 230 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 LRRC39Q96DD0 335 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 KLC2Q9H0B6 622 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 NRDE2Q9H7Z3 1164 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 RAB6BQ9NRW1 208 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 A6NJR5 290 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 ATP5HO75947 161 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 RECQL4O94761 1208 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 C1QAP02745 245 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 SMIM10L2AP0DMW4 78 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 SMIM10L2BP0DMW5 78 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 L1CAMP32004 1257 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 ACADSBP45954 432 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 NR2C2P49116 596 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 NEK3P51956 506 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 PLEKHH3Q7Z736 793 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 TBC1D1Q86TI0 1168 aaPredicted RBP18.42■□□□□ 0.54
SCARB1-208ENST00000544327 AGGF1Q8N302 714 aaeCLIP18.42■□□□□ 0.547e-7■■■■■ 27.5
SCARB1-208ENST00000544327 KBTBD7Q8WVZ9 684 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 ZNF560Q96MR9 790 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 DNAI2Q9GZS0 605 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 POPDC2Q9HBU9 364 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 SLCO1B3Q9NPD5 702 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 ETNK2Q9NVF9 386 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 ZNF180Q9UJW8 692 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 TTLL3Q9Y4R7 772 aa18.42■□□□□ 0.54
SCARB1-208ENST00000544327 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 TRDMT1O14717 391 aaKnown RBP18.41■□□□□ 0.54
SCARB1-208ENST00000544327 ADCY6O43306 1168 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 DCTN3O75935 186 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 MT-ND3P03897 115 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 DHRS4L1P0CG22 281 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 KCNE1P15382 129 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 CYP2F1P24903 491 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 PNPLA4P41247 253 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 MAGEA3P43357 314 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 PTK7Q13308 1070 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 SETDB1Q15047 1291 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 KBTBD12Q3ZCT8 623 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 FBXO47Q5MNV8 452 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 CHSY1Q86X52 802 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 TCP10LQ8TDR4 215 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 HSFY1Q96LI6 401 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 FAM49AQ9H0Q0 323 aaPredicted RBP18.41■□□□□ 0.54
SCARB1-208ENST00000544327 DPEP3Q9H4B8 488 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 PRDM16Q9HAZ2 1276 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 CDHR5Q9HBB8 845 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 CD248Q9HCU0 757 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 TXLNGQ9NUQ3 528 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 SLC5A4Q9NY91 659 aa18.41■□□□□ 0.54
SCARB1-208ENST00000544327 SLC15A5A6NIM6 579 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 A8MXQ7 604 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 IGF2BP3O00425 579 aaKnown RBP eCLIP18.4■□□□□ 0.543e-8■■■■□ 21.1
SCARB1-208ENST00000544327 GCATO75600 419 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 UNC5CO95185 931 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 FGFR1P11362 822 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 TPSB2P20231 275 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 PRKCHP24723 683 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 ADRA1DP25100 572 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 ALDH3A1P30838 453 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 SLC8A1P32418 973 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 GTF2A1P52655 376 aaPredicted RBP18.4■□□□□ 0.54
SCARB1-208ENST00000544327 KCNJ2P63252 427 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 TPSAB1Q15661 275 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 FAM110CQ1W6H9 321 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 SLC45A4Q5BKX6 768 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 OTOAQ7RTW8 1153 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 CAND1Q86VP6 1230 aaKnown RBP18.4■□□□□ 0.54
SCARB1-208ENST00000544327 NPLOC4Q8TAT6 608 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 APBB2Q92870 758 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms