RNA–Protein interactions for RNA: ENST00000544140.5

MRPL48-213, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 2

Gene MRPL48, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-213ENST00000544140 SMYD3Q9H7B4 428 aa12.78□□□□□ -0.36
MRPL48-213ENST00000544140 ZDHHC4Q9NPG8 344 aa12.78□□□□□ -0.36
MRPL48-213ENST00000544140 CYLDQ9NQC7 956 aa12.78□□□□□ -0.36
MRPL48-213ENST00000544140 DMAC2Q9NW81 257 aa12.78□□□□□ -0.36
MRPL48-213ENST00000544140 MARK1Q9P0L2 795 aa12.78□□□□□ -0.36
MRPL48-213ENST00000544140 DEC1Q9P2X7 70 aa12.78□□□□□ -0.36
MRPL48-213ENST00000544140 NXF1Q9UBU9 619 aaKnown RBP12.78□□□□□ -0.36
MRPL48-213ENST00000544140 ZMIZ1Q9ULJ6 1067 aa12.78□□□□□ -0.36
MRPL48-213ENST00000544140 LOC400499M0QZD8 3231 aa12.78□□□□□ -0.36
MRPL48-213ENST00000544140 TBC1D3BA6NDS4 549 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 LRRIQ3A6PVS8 624 aaPredicted RBP12.77□□□□□ -0.37
MRPL48-213ENST00000544140 CACNG3O60359 315 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 VNN1O95497 513 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 TOP3BO95985 862 aaKnown RBP12.77□□□□□ -0.37
MRPL48-213ENST00000544140 ITPKAP23677 461 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 CASP4P49662 377 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 FOXC1Q12948 553 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 NELFCDQ8IXH7 590 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 ZNF513Q8N8E2 541 aaPredicted RBP12.77□□□□□ -0.37
MRPL48-213ENST00000544140 DEFB124Q8NES8 71 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 CEP76Q8TAP6 659 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 SMOQ99835 787 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 GABRG3Q99928 467 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 KLF16Q9BXK1 252 aaPredicted RBP12.77□□□□□ -0.37
MRPL48-213ENST00000544140 GMIPQ9P107 970 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 TFIP11Q9UBB9 837 aaKnown RBP12.77□□□□□ -0.37
MRPL48-213ENST00000544140 SLC6A14Q9UN76 642 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 CEP192Q8TEP8 1941 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 ATP8B3O60423 1300 aa12.77□□□□□ -0.37
MRPL48-213ENST00000544140 SMG1Q96Q15 3661 aaKnown RBP12.76□□□□□ -0.37
MRPL48-213ENST00000544140 TRIM24O15164 1050 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 AP5Z1O43299 807 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 TLR5O60602 858 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 EXOC3O60645 756 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 BEST1O76090 585 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 SERPINF2P08697 491 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 SPINK2P20155 84 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 NTSR1P30989 418 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 IFRD2Q12894 506 aaPredicted RBP12.76□□□□□ -0.37
MRPL48-213ENST00000544140 NCOA4Q13772 614 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 DUOXA1Q1HG43 343 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 ZNF699Q32M78 642 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 ZACNQ401N2 412 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 ZNF667Q5HYK9 610 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 BTBD8Q5XKL5 378 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 KLHDC10Q6PID8 442 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 SLC36A4Q6YBV0 504 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 NUDT18Q6ZVK8 323 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 RABEPKQ7Z6M1 372 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 UNC93AQ86WB7 457 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 ZNF276Q8N554 614 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 NAT16Q8N8M0 369 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 GOLGA5Q8TBA6 731 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 FBXO44Q9H4M3 255 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 KRT82Q9NSB4 513 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 CALCOCO1Q9P1Z2 691 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 BCCIPQ9P287 314 aaKnown RBP eCLIP12.76□□□□□ -0.37
MRPL48-213ENST00000544140 FBXO10Q9UK96 956 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 SH3BP1Q9Y3L3 701 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 NEUROG3Q9Y4Z2 214 aa12.76□□□□□ -0.37
MRPL48-213ENST00000544140 IGHV1OR15-9A0A0B4J2B8 117 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 PRRT4C9JH25 899 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 HHLA1C9JL84 531 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 POLR2DO15514 142 aaKnown RBP12.75□□□□□ -0.37
MRPL48-213ENST00000544140 KLRC4O43908 158 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 ZNF217O75362 1048 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 GJB3O75712 270 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 AP1G2O75843 785 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 ASS1P00966 412 aaKnown RBP12.75□□□□□ -0.37
MRPL48-213ENST00000544140 RPN1P04843 607 aaKnown RBP12.75□□□□□ -0.37
MRPL48-213ENST00000544140 HOXB2P14652 356 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 CASP1P29466 404 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 ZNF33AQ06730 810 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 CUL4BQ13620 913 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 SGSM1Q2NKQ1 1148 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 UAP1L1Q3KQV9 507 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 C10orf76Q5T2E6 689 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 ARMCX6Q7L4S7 300 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 ACOT1Q86TX2 421 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 TTC30AQ86WT1 665 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 SLC41A1Q8IVJ1 513 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 TAF4BQ92750 862 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 ZNF419Q96HQ0 510 aaPredicted RBP12.75□□□□□ -0.37
MRPL48-213ENST00000544140 ZNF396Q96N95 335 aaPredicted RBP12.75□□□□□ -0.37
MRPL48-213ENST00000544140 BLZF1Q9H2G9 400 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 SLC32A1Q9H598 525 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 OCEL1Q9H607 264 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 PNPLA8Q9NP80 782 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 SLC39A2Q9NP94 309 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 OSER1Q9NX31 292 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 HMGXB4Q9UGU5 601 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 MSRB2Q9Y3D2 182 aa12.75□□□□□ -0.37
MRPL48-213ENST00000544140 ATXN2Q99700 1313 aaKnown RBP12.74□□□□□ -0.37
MRPL48-213ENST00000544140 A0A1W2PQD8 194 aa12.74□□□□□ -0.37
MRPL48-213ENST00000544140 GFRA2O00451 464 aa12.74□□□□□ -0.37
MRPL48-213ENST00000544140 IKBKBO14920 756 aa12.74□□□□□ -0.37
MRPL48-213ENST00000544140 PHACTR2O75167 634 aa12.74□□□□□ -0.37
MRPL48-213ENST00000544140 CAPNS1P04632 268 aa12.74□□□□□ -0.37
MRPL48-213ENST00000544140 CISD3P0C7P0 127 aa12.74□□□□□ -0.37
MRPL48-213ENST00000544140 CCDC130P13994 396 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms