RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 NOX5Q96PH1 765 aa15.83■□□□□ 0.12
CD9-210ENST00000543916 AGPAT1Q99943 283 aa15.83■□□□□ 0.12
CD9-210ENST00000543916 SYT11Q9BT88 431 aa15.83■□□□□ 0.12
CD9-210ENST00000543916 TRIM5Q9C035 493 aa15.83■□□□□ 0.12
CD9-210ENST00000543916 MUC3AQ02505 3323 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 LEFTY2O00292 366 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 LTFP02788 710 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 CCDC172P0C7W6 258 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 RALAP11233 206 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 TCF3P15923 654 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 ATP5C1P36542 298 aaKnown RBP15.82■□□□□ 0.12
CD9-210ENST00000543916 PRKCIP41743 596 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 FCHO2Q0JRZ9 810 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 C10orf120Q5SQS8 335 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 BTBD8Q5XKL5 378 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 FAM183BPQ6ZVS7 135 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 FMNL3Q8IVF7 1028 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 UBALD2Q8IYN6 164 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 TTC16Q8NEE8 873 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 EDEM1Q92611 657 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 ASIC4Q96FT7 647 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 ZFYVE19Q96K21 471 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 TRMT61BQ9BVS5 477 aaKnown RBP15.82■□□□□ 0.12
CD9-210ENST00000543916 NACA2Q9H009 215 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 GKN1Q9NS71 199 aa15.82■□□□□ 0.12
CD9-210ENST00000543916 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.82■□□□□ 0.12
CD9-210ENST00000543916 PI4K2BG5E9Z4 385 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 FYNP06241 537 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 SKILP12757 684 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 GDI1P31150 447 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 GABRB2P47870 512 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 ZNF75DP51815 510 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 MTF1Q14872 753 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 TAF5Q15542 800 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 CLEC16AQ2KHT3 1053 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 C2CD6Q53TS8 623 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 HGSNATQ68CP4 663 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 KLHDC10Q6PID8 442 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 TRIM72Q6ZMU5 477 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 ZNF571Q7Z3V5 609 aaPredicted RBP15.81■□□□□ 0.12
CD9-210ENST00000543916 YAF2Q8IY57 180 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 ZNF397Q8NF99 534 aaPredicted RBP15.81■□□□□ 0.12
CD9-210ENST00000543916 SLC30A5Q8TAD4 765 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 EDAQ92838 391 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 WBP2Q969T9 261 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 KLF16Q9BXK1 252 aaPredicted RBP15.81■□□□□ 0.12
CD9-210ENST00000543916 HAUS4Q9H6D7 363 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 SLC2A4RGQ9NR83 387 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 ABCC13Q9NSE7 274 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 SEPT11Q9NVA2 429 aaKnown RBP15.81■□□□□ 0.12
CD9-210ENST00000543916 CFAP97Q9P2B7 532 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 RASAL2Q9UJF2 1139 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 DNMT3LQ9UJW3 386 aa15.81■□□□□ 0.12
CD9-210ENST00000543916 LUC7L2Q9Y383 392 aaKnown RBP15.81■□□□□ 0.12
CD9-210ENST00000543916 ARNTLO00327 626 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 SCAMP3O14828 347 aaKnown RBP15.8■□□□□ 0.12
CD9-210ENST00000543916 CHADO15335 359 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 SART1O43290 800 aaKnown RBP15.8■□□□□ 0.12
CD9-210ENST00000543916 IRF1P10914 325 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 UNGP13051 313 aaPredicted RBP15.8■□□□□ 0.12
CD9-210ENST00000543916 ALADP13716 330 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 GOLGA8FQ08AF8 430 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 GOLGA8DPQ0D2H9 430 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 KLHL30Q0D2K2 578 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 EFEMP1Q12805 493 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 TRIM14Q14142 442 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 IER5LQ5T953 404 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 OR6B2Q6IFH4 312 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 OLFML1Q6UWY5 402 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 RSRC2Q7L4I2 434 aaKnown RBP15.8■□□□□ 0.12
CD9-210ENST00000543916 TADA2BQ86TJ2 420 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 ERICH1Q86X53 443 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 MIB1Q86YT6 1006 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 IPO4Q8TEX9 1081 aaKnown RBP15.8■□□□□ 0.12
CD9-210ENST00000543916 SYN2Q92777 582 aaPredicted RBP15.8■□□□□ 0.12
CD9-210ENST00000543916 FAM149B1Q96BN6 582 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 CDK5RAP1Q96SZ6 601 aaKnown RBP15.8■□□□□ 0.12
CD9-210ENST00000543916 NUCKS1Q9H1E3 243 aaKnown RBP15.8■□□□□ 0.12
CD9-210ENST00000543916 EPHX3Q9H6B9 360 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 SYNCQ9H7C4 482 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 BRD9Q9H8M2 597 aa15.8■□□□□ 0.12
CD9-210ENST00000543916 TTC28Q96AY4 2481 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 DLL1O00548 723 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 ZNF263O14978 683 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 TNFAIP3P21580 790 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 MMP8P22894 467 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 CENPCQ03188 943 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 PTP4A2Q12974 167 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 TBX2Q13207 712 aaPredicted RBP15.79■□□□□ 0.12
CD9-210ENST00000543916 ARHGAP29Q52LW3 1261 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 TRIM68Q6AZZ1 485 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 MSANTD2Q6P1R3 559 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 MMS22LQ6ZRQ5 1243 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 TMC6Q7Z403 805 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 DDX42Q86XP3 938 aaKnown RBP eCLIP15.79■□□□□ 0.12
CD9-210ENST00000543916 XYLT1Q86Y38 959 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 RNF139Q8WU17 664 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 GOLGA1Q92805 767 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 C18orf8Q96DM3 657 aa15.79■□□□□ 0.12
CD9-210ENST00000543916 MRFAP1L1Q96HT8 127 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms