RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 CCDC33Q8N5R6 958 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 NAT8LQ8N9F0 302 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 FEZF2Q8TBJ5 459 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 ZNF512Q96ME7 567 aaPredicted RBP13.13□□□□□ -0.31
SMG8-202ENST00000543872 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
SMG8-202ENST00000543872 MYH14Q7Z406 1995 aaKnown RBP13.13□□□□□ -0.31
SMG8-202ENST00000543872 TOGARAM1Q9Y4F4 1720 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 DCXO43602 365 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 KLHL2O95198 593 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 THRAP10827 490 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 ITGAXP20702 1163 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 NRF1Q16656 503 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 TTC39BQ5VTQ0 682 aaPredicted RBP13.13□□□□□ -0.31
SMG8-202ENST00000543872 FBXW8Q8N3Y1 598 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 GFM2Q969S9 779 aaKnown RBP13.13□□□□□ -0.31
SMG8-202ENST00000543872 C1orf112Q9NSG2 853 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 PCDHB2Q9Y5E7 798 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 SRCAPQ6ZRS2 3230 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 KLF11O14901 512 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 FOSP01100 380 aaPredicted RBP13.12□□□□□ -0.31
SMG8-202ENST00000543872 KCNA4P22459 653 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 MRPS5P82675 430 aaKnown RBP13.12□□□□□ -0.31
SMG8-202ENST00000543872 PGM2L1Q6PCE3 622 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 TMEM270Q6UE05 265 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 MON1BQ7L1V2 547 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 TSPAN14Q8NG11 270 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 MCEEQ96PE7 176 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 PLGRKTQ9HBL7 147 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 MAN1C1Q9NR34 630 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 PNPOQ9NVS9 261 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 PSMD13Q9UNM6 376 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 SF3B1O75533 1304 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMG8-202ENST00000543872 hCG_1818297A0A087WSY0 165 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 SH3PXD2BA1X283 911 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 PSMD6Q15008 389 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 TFDP3Q5H9I0 405 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 Q6ZNX1 250 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 SH2D5Q6ZV89 423 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 KBTBD6Q86V97 674 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 SLC26A11Q86WA9 606 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 AHI1Q8N157 1196 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 PHTF2Q8N3S3 785 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 ACTRT2Q8TDY3 377 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 TMEM8AQ9HCN3 771 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 DDX4Q9NQI0 724 aaKnown RBP13.12□□□□□ -0.31
SMG8-202ENST00000543872 FETUBQ9UGM5 382 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 PCDHB4Q9Y5E5 795 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 RGL2O15211 777 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 DGKIO75912 1065 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 ITGAVP06756 1048 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 RELAQ04206 551 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 C6orf183Q5T699 404 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 FAXCQ5TGI0 409 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 PACS1Q6VY07 963 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 AGR3Q8TD06 166 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 TFB1MQ8WVM0 346 aaKnown RBP13.12□□□□□ -0.31
SMG8-202ENST00000543872 ZNF577Q9BSK1 485 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 ZNRF3Q9ULT6 936 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 SPO11Q9Y5K1 396 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 WNK3Q9BYP7 1800 aa13.12□□□□□ -0.31
SMG8-202ENST00000543872 IGKV6D-41A0A0C4DH26 115 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 ARP10275 920 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 GPC3P51654 580 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 PKNOX1P55347 436 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 BRDTQ58F21 947 aaPredicted RBP13.11□□□□□ -0.31
SMG8-202ENST00000543872 PDPK2PQ6A1A2 396 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 ERI1Q8IV48 349 aaKnown RBP13.11□□□□□ -0.31
SMG8-202ENST00000543872 SETDB2Q96T68 719 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 IP6K2Q9UHH9 426 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 CROTQ9UKG9 612 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 NUB1Q9Y5A7 615 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 E2F8A0AVK6 867 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 PSMD10O75832 226 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 TCN1P20061 433 aaPredicted RBP13.11□□□□□ -0.31
SMG8-202ENST00000543872 SLC5A3P53794 718 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 CDH15P55291 814 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 WASHC5Q12768 1159 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 ATP1A4Q13733 1029 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 MYBPC2Q14324 1141 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 TEX44Q53QW1 395 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 FASTKD1Q53R41 847 aaKnown RBP13.11□□□□□ -0.31
SMG8-202ENST00000543872 FASTKD5Q7L8L6 764 aaKnown RBP13.11□□□□□ -0.31
SMG8-202ENST00000543872 CPNE9Q8IYJ1 553 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 DQX1Q8TE96 717 aaKnown RBP13.11□□□□□ -0.31
SMG8-202ENST00000543872 NKD2Q969F2 451 aaPredicted RBP13.11□□□□□ -0.31
SMG8-202ENST00000543872 PPP1R36Q96LQ0 422 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 CD209Q9NNX6 404 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 TSC22D4Q9Y3Q8 395 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 CASQ2O14958 399 aaPredicted RBP13.11□□□□□ -0.31
SMG8-202ENST00000543872 BPGMP07738 259 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 SHMT1P34896 483 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 TMED10P49755 219 aaKnown RBP13.11□□□□□ -0.31
SMG8-202ENST00000543872 STAT2P52630 851 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 DRICH1Q6PGQ1 229 aaPredicted RBP13.11□□□□□ -0.31
SMG8-202ENST00000543872 PIWIL2Q8TC59 973 aaKnown RBP13.11□□□□□ -0.31
SMG8-202ENST00000543872 USP13Q92995 863 aaPredicted RBP13.11□□□□□ -0.31
SMG8-202ENST00000543872 CMTM5Q96DZ9 223 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 ZNF696Q9H7X3 374 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 C17orf75Q9HAS0 396 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 THAP1Q9NVV9 213 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms