RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 FRYQ5TBA9 3013 aa23.92■■□□□ 1.42
CDKN3-207ENST00000543789 CHD6Q8TD26 2715 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 THADAQ6YHU6 1953 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 A0A1W2PQF6 199 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 TMEM8BA6NDV4 472 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 VNN1O95497 513 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 TBX18O95935 607 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 CCDC130P13994 396 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 MAP3K7CLP57077 242 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 GFPT1Q06210 699 aaPredicted RBP23.91■■□□□ 1.42
CDKN3-207ENST00000543789 MIB1Q86YT6 1006 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 CRYBG2Q8N1P7 616 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 HDDC3Q8N4P3 179 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 SLC2A14Q8TDB8 520 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 XPO6Q96QU8 1125 aaKnown RBP23.91■■□□□ 1.42
CDKN3-207ENST00000543789 KLF16Q9BXK1 252 aaPredicted RBP23.91■■□□□ 1.42
CDKN3-207ENST00000543789 CSNK1G1Q9HCP0 422 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 DNAJC17Q9NVM6 304 aaKnown RBP23.91■■□□□ 1.42
CDKN3-207ENST00000543789 DMAC2Q9NW81 257 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 FAM13BQ9NYF5 915 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 WDR35Q9P2L0 1181 aa23.91■■□□□ 1.42
CDKN3-207ENST00000543789 HELZP42694 1942 aaKnown RBP23.9■■□□□ 1.42
CDKN3-207ENST00000543789 UPK3BL1B0FP48 263 aa23.9■■□□□ 1.42
CDKN3-207ENST00000543789 UPK3BL2E5RIL1 263 aa23.9■■□□□ 1.42
CDKN3-207ENST00000543789 K7ELQ4 463 aaPredicted RBP23.9■■□□□ 1.42
CDKN3-207ENST00000543789 GREM1O60565 184 aa23.9■■□□□ 1.42
CDKN3-207ENST00000543789 ZNF217O75362 1048 aa23.9■■□□□ 1.42
CDKN3-207ENST00000543789 RPN1P04843 607 aaKnown RBP23.9■■□□□ 1.42
CDKN3-207ENST00000543789 SERPINF2P08697 491 aa23.9■■□□□ 1.42
CDKN3-207ENST00000543789 ZNF33AQ06730 810 aa23.9■■□□□ 1.42
CDKN3-207ENST00000543789 SEMA3BQ13214 749 aa23.9■■□□□ 1.42
CDKN3-207ENST00000543789 EGFLAMQ63HQ2 1017 aa23.9■■□□□ 1.42
CDKN3-207ENST00000543789 RABEPKQ7Z6M1 372 aa23.9■■□□□ 1.42
CDKN3-207ENST00000543789 PIP4P1Q86T03 277 aa23.9■■□□□ 1.42
CDKN3-207ENST00000543789 CHPFQ8IZ52 775 aa23.9■■□□□ 1.42
CDKN3-207ENST00000543789 GATA6Q92908 595 aa23.9■■□□□ 1.42
CDKN3-207ENST00000543789 GTPBP2Q9BX10 602 aaKnown RBP23.9■■□□□ 1.42
CDKN3-207ENST00000543789 BBS2Q9BXC9 721 aa23.9■■□□□ 1.42
CDKN3-207ENST00000543789 PTPRDP23468 1912 aa23.9■■□□□ 1.42
CDKN3-207ENST00000543789 NEDD8-MDP1E9PL57 170 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 TYRP14679 529 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 ATP5C1P36542 298 aaKnown RBP23.89■■□□□ 1.41
CDKN3-207ENST00000543789 NDST1P52848 882 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 GOLGA8FQ08AF8 430 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 GOLGA8DPQ0D2H9 430 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 ORC1Q13415 861 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 KIAA1211LQ6NV74 962 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 TPGS1Q6ZTW0 290 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 UNC93AQ86WB7 457 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 C12orf29Q8N999 325 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 IPO4Q8TEX9 1081 aaKnown RBP23.89■■□□□ 1.41
CDKN3-207ENST00000543789 ACOX2Q99424 681 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 CYLDQ9NQC7 956 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 FSCN3Q9NQT6 498 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 LSM7Q9UK45 103 aaKnown RBP23.89■■□□□ 1.41
CDKN3-207ENST00000543789 SCML2Q9UQR0 700 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 NUP205Q92621 2012 aa23.89■■□□□ 1.41
CDKN3-207ENST00000543789 IGHV1OR15-9A0A0B4J2B8 117 aa23.88■■□□□ 1.41
CDKN3-207ENST00000543789 CACNG3O60359 315 aa23.88■■□□□ 1.41
CDKN3-207ENST00000543789 SIM1P81133 766 aaPredicted RBP23.88■■□□□ 1.41
CDKN3-207ENST00000543789 FOXD4L5Q5VV16 416 aaPredicted RBP23.88■■□□□ 1.41
CDKN3-207ENST00000543789 SLC9A9Q8IVB4 645 aa23.88■■□□□ 1.41
CDKN3-207ENST00000543789 TMEM174Q8WUU8 243 aa23.88■■□□□ 1.41
CDKN3-207ENST00000543789 FOXD4L4Q8WXT5 416 aaPredicted RBP23.88■■□□□ 1.41
CDKN3-207ENST00000543789 TAF4BQ92750 862 aa23.88■■□□□ 1.41
CDKN3-207ENST00000543789 CAPN10Q9HC96 672 aa23.88■■□□□ 1.41
CDKN3-207ENST00000543789 MARK1Q9P0L2 795 aa23.88■■□□□ 1.41
CDKN3-207ENST00000543789 PCDHA7Q9UN72 937 aa23.88■■□□□ 1.41
CDKN3-207ENST00000543789 SPAARA0A1B0GVQ0 90 aa23.87■■□□□ 1.41
CDKN3-207ENST00000543789 HYAL3O43820 417 aaPredicted RBP23.87■■□□□ 1.41
CDKN3-207ENST00000543789 OPHN1O60890 802 aa23.87■■□□□ 1.41
CDKN3-207ENST00000543789 FAM200BP0CF97 657 aa23.87■■□□□ 1.41
CDKN3-207ENST00000543789 ME1P48163 572 aa23.87■■□□□ 1.41
CDKN3-207ENST00000543789 DLG4P78352 724 aa23.87■■□□□ 1.41
CDKN3-207ENST00000543789 STK4Q13043 487 aa23.87■■□□□ 1.41
CDKN3-207ENST00000543789 ZACNQ401N2 412 aa23.87■■□□□ 1.41
CDKN3-207ENST00000543789 CEP57L1Q8IYX8 460 aa23.87■■□□□ 1.41
CDKN3-207ENST00000543789 GABRG3Q99928 467 aa23.87■■□□□ 1.41
CDKN3-207ENST00000543789 CD248Q9HCU0 757 aa23.87■■□□□ 1.41
CDKN3-207ENST00000543789 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.87■■□□□ 1.419e-13■■■■■ 192.3
CDKN3-207ENST00000543789 FAM49BQ9NUQ9 324 aa23.87■■□□□ 1.41
CDKN3-207ENST00000543789 HMGXB4Q9UGU5 601 aa23.87■■□□□ 1.41
CDKN3-207ENST00000543789 CYP8B1Q9UNU6 501 aa23.87■■□□□ 1.41
CDKN3-207ENST00000543789 NEUROG3Q9Y4Z2 214 aa23.87■■□□□ 1.41
CDKN3-207ENST00000543789 PRRT4C9JH25 899 aa23.86■■□□□ 1.41
CDKN3-207ENST00000543789 NDUFV2P19404 249 aa23.86■■□□□ 1.41
CDKN3-207ENST00000543789 TRIM21P19474 475 aaKnown RBP23.86■■□□□ 1.41
CDKN3-207ENST00000543789 RDXP35241 583 aaKnown RBP23.86■■□□□ 1.41
CDKN3-207ENST00000543789 FOXD4L6Q3SYB3 417 aaPredicted RBP23.86■■□□□ 1.41
CDKN3-207ENST00000543789 RESP18Q5W5W9 173 aa23.86■■□□□ 1.41
CDKN3-207ENST00000543789 FOXD4L3Q6VB84 417 aaPredicted RBP23.86■■□□□ 1.41
CDKN3-207ENST00000543789 TOGARAM2Q6ZUX3 1019 aa23.86■■□□□ 1.41
CDKN3-207ENST00000543789 SV2AQ7L0J3 742 aa23.86■■□□□ 1.41
CDKN3-207ENST00000543789 SLC41A1Q8IVJ1 513 aa23.86■■□□□ 1.41
CDKN3-207ENST00000543789 GRAMD1CQ8IYS0 662 aa23.86■■□□□ 1.41
CDKN3-207ENST00000543789 TRIML1Q8N9V2 468 aa23.86■■□□□ 1.41
CDKN3-207ENST00000543789 TMC2Q8TDI7 906 aa23.86■■□□□ 1.41
CDKN3-207ENST00000543789 HNRNPABQ99729 332 aaKnown RBP23.86■■□□□ 1.41
CDKN3-207ENST00000543789 OSER1Q9NX31 292 aa23.86■■□□□ 1.41
CDKN3-207ENST00000543789 A0A1W2PQD8 194 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms