RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 DENND1AQ8TEH3 1009 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 ZNF670Q9BS34 389 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 KPNA7A9QM74 516 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 SPTLC1O15269 473 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 SUN1O94901 812 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 PDGFRBP09619 1106 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 ZNF865P0CJ78 1059 aaPredicted RBP14.49□□□□□ -0.09
MSH2-206ENST00000543555 TAC1P20366 129 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 ADORA2BP29275 332 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 BCAT1P54687 386 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 BCAR1P56945 870 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 INHBEP58166 350 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 MTM1Q13496 603 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 KCNJ11Q14654 390 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 PALM2Q8IXS6 379 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 C4orf33Q8N1A6 199 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 FBF1Q8TES7 1133 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 ZNF560Q96MR9 790 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 DHRS4Q9BTZ2 278 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 GDAP2Q9NXN4 497 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 HEY1Q9Y5J3 304 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 HAS3O00219 553 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 TREHO43280 583 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 LMO2P25791 158 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 FOXN2P32314 431 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 GNL1P36915 607 aaPredicted RBP14.48□□□□□ -0.09
MSH2-206ENST00000543555 PTPN9P43378 593 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 XKR4Q5GH76 650 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 UBXN11Q5T124 520 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 SLC26A9Q7LBE3 791 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 SPATA21Q7Z572 469 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 CLEC4CQ8WTT0 213 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 RTP4Q96DX8 246 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 PAIP2Q9BPZ3 127 aaKnown RBP14.48□□□□□ -0.09
MSH2-206ENST00000543555 PAK5Q9P286 719 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 A0A1W2PPM1 405 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 CFAP69A5D8W1 941 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 CHADO15335 359 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 KCNN4O15554 427 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 XPOTO43592 962 aaKnown RBP14.48□□□□□ -0.09
MSH2-206ENST00000543555 KCNE1P15382 129 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 TFE3P19532 575 aaPredicted RBP14.48□□□□□ -0.09
MSH2-206ENST00000543555 TRIM32Q13049 653 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 FAF2Q96CS3 445 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 PAFAH2Q99487 392 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 C11orf84Q9BUA3 381 aaPredicted RBP14.48□□□□□ -0.09
MSH2-206ENST00000543555 RNF39Q9H2S5 420 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 ABCF3Q9NUQ8 709 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 CHMP2BQ9UQN3 213 aa14.48□□□□□ -0.09
MSH2-206ENST00000543555 ZNF487B1APH4 448 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 SCNN1AP37088 669 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 PNPLA4P41247 253 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 RPL34P49207 117 aaKnown RBP14.47□□□□□ -0.09
MSH2-206ENST00000543555 ZNF200P98182 395 aaPredicted RBP14.47□□□□□ -0.09
MSH2-206ENST00000543555 SPARCL1Q14515 664 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 ZNF618Q5T7W0 954 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 CGB2Q6NT52 195 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 ADGRD1Q6QNK2 874 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 TSPAN18Q96SJ8 248 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 ADAM33Q9BZ11 813 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 SNX25Q9H3E2 840 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 RNF186Q9NXI6 227 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 SLC12A4Q9UP95 1085 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 BCLAF3A2AJT9 711 aaKnown RBP14.47□□□□□ -0.09
MSH2-206ENST00000543555 TYROBPO43914 113 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 GSTA1P08263 222 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 RBL1P28749 1068 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 HNRNPH1P31943 449 aaKnown RBP14.47□□□□□ -0.09
MSH2-206ENST00000543555 ELK3P41970 407 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 TAF6P49848 677 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 MTFR1Q15390 333 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 PPP6R3Q5H9R7 873 aaPredicted RBP14.47□□□□□ -0.09
MSH2-206ENST00000543555 ARCQ7LC44 396 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 CENPIQ92674 756 aaPredicted RBP14.47□□□□□ -0.09
MSH2-206ENST00000543555 GOLGA2P5Q9HBQ8 144 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 CYLDQ9NQC7 956 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 RAB6BQ9NRW1 208 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 RASSF9O75901 435 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 DNAJC8O75937 253 aaPredicted RBP14.47□□□□□ -0.09
MSH2-206ENST00000543555 ZBED1O96006 694 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 MYL3P08590 195 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 LCP1P13796 627 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 ATP2A2P16615 1042 aaKnown RBP14.47□□□□□ -0.09
MSH2-206ENST00000543555 CA4P22748 312 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 RPA3P35244 121 aaPredicted RBP14.47□□□□□ -0.09
MSH2-206ENST00000543555 CPT1AP50416 773 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 SOX4Q06945 474 aaPredicted RBP14.47□□□□□ -0.09
MSH2-206ENST00000543555 DPYSL2Q16555 572 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 LIMS2Q7Z4I7 341 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 IGDCC3Q8IVU1 814 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 APPL2Q8NEU8 664 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 SLC40A1Q9NP59 571 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 SSU72Q9NP77 194 aaKnown RBP14.47□□□□□ -0.09
MSH2-206ENST00000543555 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.47□□□□□ -0.09
MSH2-206ENST00000543555 PRKAG3Q9UGI9 489 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 ARL2BPQ9Y2Y0 163 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 TEX264Q9Y6I9 313 aa14.47□□□□□ -0.09
MSH2-206ENST00000543555 PDCD11Q14690 1871 aaKnown RBP14.46□□□□□ -0.09
MSH2-206ENST00000543555 PIAS1O75925 651 aa14.46□□□□□ -0.09
MSH2-206ENST00000543555 ELNP15502 786 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms