RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 KCNH2Q12809 1159 aa19.58■□□□□ 0.72
TMED3-204ENST00000543455 PKDCCQ504Y2 493 aa19.58■□□□□ 0.72
TMED3-204ENST00000543455 KLHDC10Q6PID8 442 aa19.58■□□□□ 0.72
TMED3-204ENST00000543455 HTR3DQ70Z44 454 aa19.58■□□□□ 0.72
TMED3-204ENST00000543455 WDR5BQ86VZ2 330 aa19.58■□□□□ 0.72
TMED3-204ENST00000543455 LONP2Q86WA8 852 aa19.58■□□□□ 0.72
TMED3-204ENST00000543455 ZNF276Q8N554 614 aa19.58■□□□□ 0.72
TMED3-204ENST00000543455 OTUB2Q96DC9 234 aa19.58■□□□□ 0.72
TMED3-204ENST00000543455 SH3BP1Q9Y3L3 701 aa19.58■□□□□ 0.72
TMED3-204ENST00000543455 SDK1Q7Z5N4 2213 aa19.57■□□□□ 0.72
TMED3-204ENST00000543455 P4HA2O15460 535 aa19.57■□□□□ 0.72
TMED3-204ENST00000543455 ATP5C1P36542 298 aaKnown RBP19.57■□□□□ 0.72
TMED3-204ENST00000543455 TMEM25Q86YD3 366 aa19.57■□□□□ 0.72
TMED3-204ENST00000543455 ETFBKMTQ8IXQ9 262 aa19.57■□□□□ 0.72
TMED3-204ENST00000543455 USP33Q8TEY7 942 aa19.57■□□□□ 0.72
TMED3-204ENST00000543455 P2RY11Q96G91 374 aa19.57■□□□□ 0.72
TMED3-204ENST00000543455 NT5C1BQ96P26 610 aa19.57■□□□□ 0.72
TMED3-204ENST00000543455 DNAI2Q9GZS0 605 aa19.57■□□□□ 0.72
TMED3-204ENST00000543455 NACA2Q9H009 215 aa19.57■□□□□ 0.72
TMED3-204ENST00000543455 NAGPAQ9UK23 515 aa19.57■□□□□ 0.72
TMED3-204ENST00000543455 ATG13O75143 517 aa19.56■□□□□ 0.72
TMED3-204ENST00000543455 GABBR2O75899 941 aa19.56■□□□□ 0.72
TMED3-204ENST00000543455 ADH1CP00326 375 aa19.56■□□□□ 0.72
TMED3-204ENST00000543455 LPAL2Q16609 132 aa19.56■□□□□ 0.72
TMED3-204ENST00000543455 SGO2Q562F6 1265 aa19.56■□□□□ 0.72
TMED3-204ENST00000543455 TMEM270Q6UE05 265 aa19.56■□□□□ 0.72
TMED3-204ENST00000543455 IRF2BP1Q8IU81 584 aa19.56■□□□□ 0.72
TMED3-204ENST00000543455 EHBP1Q8NDI1 1231 aa19.56■□□□□ 0.72
TMED3-204ENST00000543455 NDRG1Q92597 394 aaKnown RBP19.56■□□□□ 0.72
TMED3-204ENST00000543455 EXOC4Q96A65 974 aa19.56■□□□□ 0.72
TMED3-204ENST00000543455 KREMEN1Q96MU8 473 aa19.56■□□□□ 0.72
TMED3-204ENST00000543455 CLSTN2Q9H4D0 955 aa19.56■□□□□ 0.72
TMED3-204ENST00000543455 CLIC5Q9NZA1 410 aa19.56■□□□□ 0.72
TMED3-204ENST00000543455 RWDD2AQ9UIY3 292 aa19.56■□□□□ 0.72
TMED3-204ENST00000543455 XPO1O14980 1071 aaKnown RBP19.55■□□□□ 0.72
TMED3-204ENST00000543455 HOXC11O43248 304 aaPredicted RBP19.55■□□□□ 0.72
TMED3-204ENST00000543455 GNA14O95837 355 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 VDRP11473 427 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 CD19P15391 556 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 TGM1P22735 817 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 EIF2DP41214 584 aaKnown RBP19.55■□□□□ 0.72
TMED3-204ENST00000543455 BCAT1P54687 386 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 SEC13P55735 322 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 YWHAEP62258 255 aaKnown RBP19.55■□□□□ 0.72
TMED3-204ENST00000543455 C10orf120Q5SQS8 335 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 PM20D1Q6GTS8 502 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 Q6ZNB5 142 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 RRAGAQ7L523 313 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 SYT13Q7L8C5 426 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 KIAA2013Q8IYS2 634 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 PPM1KQ8N3J5 372 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 UBA3Q8TBC4 463 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 HHIPQ96QV1 700 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 SPHK2Q9NRA0 654 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 DNMT3LQ9UJW3 386 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 DNAH14Q0VDD8 3507 aa19.55■□□□□ 0.72
TMED3-204ENST00000543455 A0A0A0MRY4 1105 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 TRIM24O15164 1050 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 STC2O76061 302 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 AFPP02771 609 aaKnown RBP19.54■□□□□ 0.72
TMED3-204ENST00000543455 PSEN1P49768 467 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 TKTL1P51854 596 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 ZNF132P52740 706 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 KDSRQ06136 332 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 BST2Q10589 180 aaKnown RBP19.54■□□□□ 0.72
TMED3-204ENST00000543455 DMC1Q14565 340 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 PNKPQ96T60 521 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 ULBP1Q9BZM6 244 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 INTS2Q9H0H0 1204 aaKnown RBP19.54■□□□□ 0.72
TMED3-204ENST00000543455 SLC8A2Q9UPR5 921 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 PCDHB4Q9Y5E5 795 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.54■□□□□ 0.72
TMED3-204ENST00000543455 KAT7O95251 611 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 KLKB1P03952 638 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 PAEPP09466 180 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 HNRNPLP14866 589 aaKnown RBP eCLIP19.54■□□□□ 0.723e-7■■■□□ 14.8
TMED3-204ENST00000543455 KIR2DL1P43626 348 aaPredicted RBP19.54■□□□□ 0.72
TMED3-204ENST00000543455 PLA2G4AP47712 749 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 GCNT1Q02742 428 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 GAD2Q05329 585 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 C2orf27AQ580R0 203 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 EMC10Q5UCC4 262 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 LCLAT1Q6UWP7 414 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 MIB1Q86YT6 1006 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 NAT16Q8N8M0 369 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 HINFPQ9BQA5 517 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 PARD6AQ9NPB6 346 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 NCDNQ9UBB6 729 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 HCN2Q9UL51 889 aa19.54■□□□□ 0.72
TMED3-204ENST00000543455 CCDC163A0A0D9SF12 145 aa19.53■□□□□ 0.72
TMED3-204ENST00000543455 TULP3O75386 442 aa19.53■□□□□ 0.72
TMED3-204ENST00000543455 ZBED1O96006 694 aa19.53■□□□□ 0.72
TMED3-204ENST00000543455 BRD2P25440 801 aaKnown RBP19.53■□□□□ 0.72
TMED3-204ENST00000543455 CNR2P34972 360 aa19.53■□□□□ 0.72
TMED3-204ENST00000543455 SIM2Q14190 667 aaPredicted RBP19.53■□□□□ 0.72
TMED3-204ENST00000543455 PRR23BQ6ZRT6 265 aa19.53■□□□□ 0.72
TMED3-204ENST00000543455 RBBP8NLQ8NC74 664 aaPredicted RBP19.53■□□□□ 0.72
TMED3-204ENST00000543455 CNOT6LQ96LI5 555 aaKnown RBP19.53■□□□□ 0.72
TMED3-204ENST00000543455 KIAA1257Q9ULG3 409 aa19.53■□□□□ 0.72
TMED3-204ENST00000543455 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms