RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 PCDH15Q96QU1 1955 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 TCRBV21S2A2A0A5A6 115 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 GIPC1O14908 333 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 ACTN4O43707 911 aaKnown RBP12.53□□□□□ -0.4
PTPN6-219ENST00000542848 TLR5O60602 858 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 BEST1O76090 585 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 ASS1P00966 412 aaKnown RBP12.53□□□□□ -0.4
PTPN6-219ENST00000542848 NR3C1P04150 777 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 MYL1P05976 194 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 CCDC130P13994 396 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 MAP3K7CLP57077 242 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 KMT5BQ4FZB7 885 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 TRIM61Q5EBN2 209 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 SH3PXD2AQ5TCZ1 1133 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 SLC23A3Q6PIS1 610 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 SV2AQ7L0J3 742 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 TMEFF1Q8IYR6 380 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 PGBD3Q8N328 593 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 TERB1Q8NA31 727 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 SLC2A14Q8TDB8 520 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 WBP2Q969T9 261 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 ELMO3Q96BJ8 720 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 HNRNPABQ99729 332 aaKnown RBP12.53□□□□□ -0.4
PTPN6-219ENST00000542848 KLF16Q9BXK1 252 aaPredicted RBP12.53□□□□□ -0.4
PTPN6-219ENST00000542848 CYLDQ9NQC7 956 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 WDR35Q9P2L0 1181 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 USP25Q9UHP3 1055 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 SCML2Q9UQR0 700 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 FRMD4BQ9Y2L6 1034 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 AKAP13Q12802 2813 aa12.53□□□□□ -0.4
PTPN6-219ENST00000542848 CKAP5Q14008 2032 aa12.52□□□□□ -0.4
PTPN6-219ENST00000542848 MAPK13O15264 365 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 AP5Z1O43299 807 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 GREM1O60565 184 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 FAM200BP0CF97 657 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 IRF1P10914 325 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 NTSR1P30989 418 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 HOXD12P35452 270 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 ATP5C1P36542 298 aaKnown RBP12.52□□□□□ -0.41
PTPN6-219ENST00000542848 PTGER3P43115 390 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 ASPAP45381 313 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 PGFP49763 221 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 GOLGA8FQ08AF8 430 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 GOLGA8DPQ0D2H9 430 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 ZNF252P-AS1Q0IIN9 211 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 C10orf76Q5T2E6 689 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 LYSMD4Q5XG99 296 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 KLHDC10Q6PID8 442 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 SLC36A4Q6YBV0 504 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 FRMD1Q8N878 549 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 C12orf29Q8N999 325 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 XPO6Q96QU8 1125 aaKnown RBP12.52□□□□□ -0.41
PTPN6-219ENST00000542848 PNPLA8Q9NP80 782 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 ZDHHC4Q9NPG8 344 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 TMEM74BQ9NUR3 256 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 MARK1Q9P0L2 795 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 HMGXB4Q9UGU5 601 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 PILRBQ9UKJ0 227 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 HCN2Q9UL51 889 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 TRAF3IP3Q9Y228 551 aa12.52□□□□□ -0.41
PTPN6-219ENST00000542848 ZBTB24O43167 697 aaPredicted RBP12.51□□□□□ -0.41
PTPN6-219ENST00000542848 CALUO43852 315 aaPredicted RBP12.51□□□□□ -0.41
PTPN6-219ENST00000542848 CACNG3O60359 315 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 KIF20AO95235 890 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 TBX18O95935 607 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 HLA-DRAP01903 254 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 PROS1P07225 676 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 HOXB2P14652 356 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 GABRG2P18507 467 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 CMA1P23946 247 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 PLA2G4AP47712 749 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 DNM1Q05193 864 aaKnown RBP12.51□□□□□ -0.41
PTPN6-219ENST00000542848 INCA1Q0VD86 236 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 ORC1Q13415 861 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 DUOXA1Q1HG43 343 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 UAP1L1Q3KQV9 507 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 C1orf220Q5T0J3 134 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 PEAR1Q5VY43 1037 aaPredicted RBP12.51□□□□□ -0.41
PTPN6-219ENST00000542848 CEP135Q66GS9 1140 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 GRAMD4Q6IC98 578 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 SPOPLQ6IQ16 392 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 SDE2Q6IQ49 451 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 CLEC20AQ6ZU45 233 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 ZNF276Q8N554 614 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 CEP76Q8TAP6 659 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 CYFIP2Q96F07 1278 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 BBS2Q9BXC9 721 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 DNAI2Q9GZS0 605 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 CYP3A43Q9HB55 503 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTPN6-219ENST00000542848 FAM49BQ9NUQ9 324 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 DNAJC17Q9NVM6 304 aaKnown RBP12.51□□□□□ -0.41
PTPN6-219ENST00000542848 CHMP5Q9NZZ3 219 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 LSM7Q9UK45 103 aaKnown RBP12.51□□□□□ -0.41
PTPN6-219ENST00000542848 WASF3Q9UPY6 502 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 PCDHA5Q9Y5H7 936 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 FAM208BQ5VWN6 2430 aa12.51□□□□□ -0.41
PTPN6-219ENST00000542848 ZZEF1O43149 2961 aa12.5□□□□□ -0.41
PTPN6-219ENST00000542848 A0A1W2PQF6 199 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms