RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 BTBD7Q9P203 1132 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 V9GYQ6 96 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 CLDN5O00501 218 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 TPST1O60507 370 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 POLBP06746 335 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 ERVK-10P10266 1014 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 ZFXP17010 805 aaPredicted RBP16.66■□□□□ 0.26
VARS2-212ENST00000542001 TAF6P49848 677 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.66■□□□□ 0.26
VARS2-212ENST00000542001 FITM2Q8N6M3 262 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 ZNF518BQ9C0D4 1074 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 ZDHHC18Q9NUE0 388 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 ABI2Q9NYB9 513 aaPredicted RBP16.66■□□□□ 0.26
VARS2-212ENST00000542001 ARHGAP28Q9P2N2 729 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 LAMA4Q16363 1823 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 C3orf70A6NLC5 250 aaPredicted RBP16.66■□□□□ 0.26
VARS2-212ENST00000542001 KPNA7A9QM74 516 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 GDF10P55107 478 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 CYTH1Q15438 398 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 GRIK4Q16099 956 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 MAP3K21Q5TCX8 1036 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 C18orf25Q96B23 403 aaPredicted RBP16.66■□□□□ 0.26
VARS2-212ENST00000542001 VCPIP1Q96JH7 1222 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 MYH11P35749 1972 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 ZNF541Q9H0D2 1346 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 RECQL4O94761 1208 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 ENDOD1O94919 500 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 EIF4BP23588 611 aaKnown RBP16.66■□□□□ 0.26
VARS2-212ENST00000542001 ATXN1P54253 815 aaKnown RBP16.66■□□□□ 0.26
VARS2-212ENST00000542001 POU6F1Q14863 301 aa16.66■□□□□ 0.26
VARS2-212ENST00000542001 EME2A4GXA9 379 aaPredicted RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 SCAMP3O14828 347 aaKnown RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 FARP2O94887 1054 aaPredicted RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 ERBB2P04626 1255 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 LGALS2P05162 132 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 FAM200BP0CF97 657 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 NBPF20Q3BBV1 942 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 FBXO47Q5MNV8 452 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 FAM117BQ6P1L5 589 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 ACAD11Q709F0 780 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 ALLCQ8N6M5 410 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 KLRG1Q96E93 195 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 SNRNP25Q9BV90 132 aaKnown RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 IARS2Q9NSE4 1012 aaKnown RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 SPATS2LQ9NUQ6 558 aaKnown RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 ZNF214Q9UL59 606 aaPredicted RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 GRID1Q9ULK0 1009 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 GPR25O00155 361 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 SH3BP5O60239 455 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 LRCH4O75427 683 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 ARF4P18085 180 aaPredicted RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 TKTL1P51854 596 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 AP2B1P63010 937 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 TSPY1Q01534 308 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 YWHAHQ04917 246 aaPredicted RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 N4BP2L1Q5TBK1 243 aaPredicted RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 KRT80Q6KB66 452 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 STRA8Q7Z7C7 330 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 DDIASQ8IXT1 998 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 ICA1LQ8NDH6 482 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 ELMO2Q96JJ3 720 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 HMGXB4Q9UGU5 601 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 MTO1Q9Y2Z2 717 aaKnown RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 PTPRJQ12913 1337 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 TBC1D12O60347 775 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 VNN1O95497 513 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 PLK1P53350 603 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 ADGRF2Q8IZF7 708 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 PDZD8Q8NEN9 1154 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 TRPV6Q9H1D0 765 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 KRT82Q9NSB4 513 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 CACNG4Q9UBN1 327 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 NPM3O75607 178 aaKnown RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 CPB1P15086 417 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 PDE1CQ14123 709 aaPredicted RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 PPP1R26Q5T8A7 1209 aaPredicted RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 TEX9Q8N6V9 391 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 EIF1ADQ8N9N8 165 aaKnown RBP16.65■□□□□ 0.26
VARS2-212ENST00000542001 RMDN1Q96DB5 314 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 MAN1C1Q9NR34 630 aa16.65■□□□□ 0.26
VARS2-212ENST00000542001 KNL1Q8NG31 2342 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 SIGLEC16A6NMB1 481 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 SEC24DO94855 1032 aaPredicted RBP16.64■□□□□ 0.25
VARS2-212ENST00000542001 TGFB3P10600 412 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 PDK1Q15118 436 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 MON1BQ7L1V2 547 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 LENG1Q96BZ8 264 aaPredicted RBP16.64■□□□□ 0.25
VARS2-212ENST00000542001 TBC1D10AQ9BXI6 508 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 WDCPQ9H6R7 721 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 SP110Q9HB58 689 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 SLC24A2Q9UI40 661 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 CNTRLQ7Z7A1 2325 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 APOC4-APOC2K7ER74 178 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 APOC2P02655 101 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 KCNA3P22001 575 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 MTFR1Q15390 333 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 FNBP1LQ5T0N5 605 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 CHADLQ6NUI6 762 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 TTC8Q8TAM2 541 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 ATXN2LQ8WWM7 1075 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms