RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 BNC2Q6ZN30 1099 aaPredicted RBP11.06□□□□□ -0.64
GABRB3-204ENST00000541819 NBPF15Q8N660 670 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 REPS1Q96D71 796 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 MKNK1Q9BUB5 465 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 LRRC40Q9H9A6 602 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 COMMD8Q9NX08 183 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 GPRC5DQ9NZD1 345 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 SPATA2Q9UM82 520 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 CHURC1-FNTBB4DL54 471 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 SNAP23O00161 211 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 RPN2P04844 631 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 CCDC130P13994 396 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 ATP6V1B1P15313 513 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 TRAF2Q12933 501 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 NFIXQ14938 502 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 CASP12Q6UXS9 341 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 PI4K2AQ9BTU6 479 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 KIFC1Q9BW19 673 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 TBC1D13Q9NVG8 400 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 SDR42E2A6NKP2 422 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 TMEM114B3SHH9 223 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 FOXN1O15353 648 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 FAM20BO75063 409 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 ENDOD1O94919 500 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 ACAD10Q6JQN1 1059 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 ARID3BQ8IVW6 561 aaPredicted RBP11.06□□□□□ -0.64
GABRB3-204ENST00000541819 ADSSL1Q8N142 457 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 SCAIQ8N9R8 606 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 PHF20Q9BVI0 1012 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 KLHL1Q9NR64 748 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 STK39Q9UEW8 545 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 VDRP11473 427 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 NDUFA5Q16718 116 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 EPHA10Q5JZY3 1008 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 TMEM26Q6ZUK4 368 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 RD3Q7Z3Z2 195 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 NECAB2Q7Z6G3 386 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 PCSK9Q8NBP7 692 aaKnown RBP11.06□□□□□ -0.64
GABRB3-204ENST00000541819 CSGALNACT1Q8TDX6 532 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 FAM151AQ8WW52 585 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 KAT2BQ92831 832 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 RMND5BQ96G75 393 aaPredicted RBP11.06□□□□□ -0.64
GABRB3-204ENST00000541819 PIGUQ9H490 435 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 EXO5Q9H790 373 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 KIAA1257Q9ULG3 409 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 ADGRA3Q8IWK6 1321 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 SLCO1B7G3V0H7 640 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 RAD51CO43502 376 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 B3GAT3O94766 335 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 UQCRBP14927 111 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 PAICSP22234 425 aaKnown RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 RPS12P25398 132 aaKnown RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 DDR2Q16832 855 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 BNIPLQ7Z465 357 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 PEG10Q86TG7 708 aaKnown RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 GATAD2AQ86YP4 633 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 SLC22A9Q8IVM8 553 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 NACC2Q96BF6 587 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 FAM111AQ96PZ2 611 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 POLG2Q9UHN1 485 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 ZBTB12Q9Y330 459 aaPredicted RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 MTA2O94776 668 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 ECDO95905 644 aaPredicted RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 SUPT20HL2P0C7V6 817 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 ACADSP16219 412 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 FGFR2P21802 821 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 GPR1P46091 355 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 VAC14Q08AM6 782 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 MTA1Q13330 715 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 GLRA4Q5JXX5 417 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 SEL1L3Q68CR1 1132 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 CBWD2Q8IUF1 395 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 CACTIN-AS1Q8N1I8 211 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 SH2D3CQ8N5H7 860 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 NSUN4Q96CB9 384 aaKnown RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 NEK6Q9HC98 313 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 MYOZ2Q9NPC6 264 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 IL1RAPL1Q9NZN1 696 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 PDP2Q9P2J9 529 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 CHORDC1Q9UHD1 332 aaPredicted RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 SNX13Q9Y5W8 968 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 SF3B1O75533 1304 aaKnown RBP eCLIP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 A0A088AWK7 358 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 A0A1W2PQJ5 194 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 FGRP09769 529 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 UMPSP11172 480 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 ZNF10P21506 573 aaPredicted RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 LHX1P48742 406 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 MRPS35P82673 323 aaKnown RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 HHIPL2Q6UWX4 724 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 PLEKHH3Q7Z736 793 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 MFSD1Q9H3U5 465 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 ACTR8Q9H981 624 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 C17orf75Q9HAS0 396 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 TLR8Q9NR97 1041 aaKnown RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 ENOPH1Q9UHY7 261 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 TBX20Q9UMR3 447 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 TDRKHQ9Y2W6 561 aaKnown RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 SH3GLB1Q9Y371 365 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 CBX4O00257 560 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms