RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 FOSBP53539 338 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 MCL1Q07820 350 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 RAD51AP2Q09MP3 1159 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 STRN3Q13033 797 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 TEAD4Q15561 434 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 FOXD4L6Q3SYB3 417 aaPredicted RBP10.4□□□□□ -0.74
CHFR-220ENST00000541817 CCDC183Q5T5S1 534 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 SCARA3Q6AZY7 606 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 GRAMD4Q6IC98 578 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 FOXD4L3Q6VB84 417 aaPredicted RBP10.4□□□□□ -0.74
CHFR-220ENST00000541817 BBS7Q8IWZ6 715 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 HIC2Q96JB3 615 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 WDR70Q9NW82 654 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 TRPM5Q9NZQ8 1165 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 CLCA2Q9UQC9 943 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 MTMR6Q9Y217 621 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 STARD13Q9Y3M8 1113 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 NFE2L3Q9Y4A8 694 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 PCDHB6Q9Y5E3 794 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 RELNP78509 3460 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 A0A1B0GTQ1 180 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 SUV39H1O43463 412 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 ATP2C2O75185 946 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 ITGAVP06756 1048 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 IRF1P10914 325 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 RPA1P27694 616 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 ACSL1P33121 698 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 CTSKP43235 329 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 TAF6P49848 677 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 INSM1Q01101 510 aaPredicted RBP10.39□□□□□ -0.75
CHFR-220ENST00000541817 IFRD2Q12894 506 aaPredicted RBP10.39□□□□□ -0.75
CHFR-220ENST00000541817 MAPK7Q13164 816 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 SHBQ15464 509 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 NFE2Q16621 373 aaPredicted RBP10.39□□□□□ -0.75
CHFR-220ENST00000541817 INAVAQ3KP66 663 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 LINC00303Q3SY05 128 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 HS1BP3Q53T59 392 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 ADAT2Q7Z6V5 191 aaKnown RBP10.39□□□□□ -0.75
CHFR-220ENST00000541817 OSTM1Q86WC4 334 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 TMPRSS6Q8IU80 811 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 SPATA2LQ8IUW3 424 aaPredicted RBP10.39□□□□□ -0.75
CHFR-220ENST00000541817 NECAB1Q8N987 351 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 SCFD1Q8WVM8 642 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 BHMTQ93088 406 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 BICD1Q96G01 975 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 PKMYT1Q99640 499 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 RUSC1Q9BVN2 902 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 AGXT2Q9BYV1 514 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 SPHK2Q9NRA0 654 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 DDX43Q9NXZ2 648 aaKnown RBP10.39□□□□□ -0.75
CHFR-220ENST00000541817 STON1Q9Y6Q2 735 aa10.39□□□□□ -0.75
CHFR-220ENST00000541817 PLXNA2O75051 1894 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 BLACEA4D250 179 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 ZNF840PA6NDX5 716 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 NEDD8-MDP1E9PL57 170 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 E9PMD0 336 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 K7ENP7 123 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 HOXC11O43248 304 aaPredicted RBP10.38□□□□□ -0.75
CHFR-220ENST00000541817 GADD45BO75293 160 aaPredicted RBP10.38□□□□□ -0.75
CHFR-220ENST00000541817 FSBPO95073 299 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 AFPP02771 609 aaKnown RBP10.38□□□□□ -0.75
CHFR-220ENST00000541817 C1SP09871 688 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 MCM7P33993 719 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 CCT6AP40227 531 aaKnown RBP10.38□□□□□ -0.75
CHFR-220ENST00000541817 GABREP78334 506 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 KRT85P78386 507 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 TLE1Q04724 770 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 BNIP3Q12983 259 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 TOB2Q14106 344 aaPredicted RBP10.38□□□□□ -0.75
CHFR-220ENST00000541817 TMEM132DQ14C87 1099 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 INTS6LQ5JSJ4 861 aaKnown RBP10.38□□□□□ -0.75
CHFR-220ENST00000541817 INO80CQ6PI98 192 aaPredicted RBP10.38□□□□□ -0.75
CHFR-220ENST00000541817 NUDT18Q6ZVK8 323 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 PDCL2Q8N4E4 241 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 FAM184AQ8NB25 1140 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 TNFRSF25Q93038 417 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 SIPA1Q96FS4 1042 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 VCPIP1Q96JH7 1222 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 NUP58Q9BVL2 599 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 GDPD2Q9HCC8 539 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 DDX19AQ9NUU7 478 aaKnown RBP10.38□□□□□ -0.75
CHFR-220ENST00000541817 DPP3Q9NY33 737 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 KIAA1024Q9UPX6 916 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 MAN2B2Q9Y2E5 1009 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 KIF3AQ9Y496 699 aa10.38□□□□□ -0.75
CHFR-220ENST00000541817 MYH10P35580 1976 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 AHCTF1Q8WYP5 2266 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 KPNA7A9QM74 516 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 FAM189A1O60320 539 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 ANKRD17O75179 2603 aaKnown RBP10.37□□□□□ -0.75
CHFR-220ENST00000541817 MT-CO3P00414 261 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 OAS1P00973 400 aaKnown RBP10.37□□□□□ -0.75
CHFR-220ENST00000541817 ABCB4P21439 1286 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 BDNFP23560 247 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 MSNP26038 577 aaKnown RBP10.37□□□□□ -0.75
CHFR-220ENST00000541817 KRT2P35908 639 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 GRIA4P48058 902 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 PDE6CP51160 858 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 TAF10Q12962 218 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 STARD3Q14849 445 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms