RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 SMPD4Q9NXE4 827 aa10.1□□□□□ -0.79
YBX3-211ENST00000541351 A0A087WWV3 80 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 LACTBL1A8MY62 500 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 KPNA7A9QM74 516 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 PIRO00625 290 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 ABLIM1O14639 778 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 KCNK3O14649 394 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 TRIM66O15016 1216 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 USP12O75317 370 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 OLFM2O95897 454 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 ABL1P00519 1130 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 SPATA31C1P0DKV0 1188 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 KRT10P13645 584 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 RPA1P27694 616 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 CDR1P51861 262 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 CDH8P55286 799 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 GOLGA8FQ08AF8 430 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 GOLGA8DPQ0D2H9 430 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 ST3GAL1Q11201 340 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 SFSWAPQ12872 951 aaKnown RBP10.09□□□□□ -0.79
YBX3-211ENST00000541351 PDIA5Q14554 519 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 MAPRE1Q15691 268 aaKnown RBP10.09□□□□□ -0.79
YBX3-211ENST00000541351 ZSCAN23Q3MJ62 389 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 Q6ZUG5 572 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 MIB1Q86YT6 1006 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 FBXL16Q8N461 479 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 ZSCAN1Q8NBB4 408 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 SPATA20Q8TB22 786 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 ACOX2Q99424 681 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 TIPINQ9BVW5 301 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 BTBD1Q9H0C5 482 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 SLC25A18Q9H1K4 315 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 HSPBP1Q9NZL4 362 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 TPX2Q9ULW0 747 aaKnown RBP10.09□□□□□ -0.79
YBX3-211ENST00000541351 STON1Q9Y6Q2 735 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 FLNCQ14315 2725 aa10.09□□□□□ -0.79
YBX3-211ENST00000541351 ZNF840PA6NDX5 716 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 KCNJ18B7U540 433 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 CACNG3O60359 315 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 HUS1O60921 280 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 CDKL5O76039 1030 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 SEMA4FO95754 770 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 SCP2P22307 547 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 LHX1P48742 406 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 DGKGP49619 791 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 ZXDBP98169 803 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 NFKB2Q00653 900 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 TTC31Q49AM3 519 aaPredicted RBP10.08□□□□□ -0.8
YBX3-211ENST00000541351 SEZ6Q53EL9 994 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 INTS6LQ5JSJ4 861 aaKnown RBP10.08□□□□□ -0.8
YBX3-211ENST00000541351 TDRD10Q5VZ19 366 aaKnown RBP10.08□□□□□ -0.8
YBX3-211ENST00000541351 ARL14Q8N4G2 192 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 PDZD8Q8NEN9 1154 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 FAM212AQ96EL1 285 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 SGF29Q96ES7 293 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 BBS2Q9BXC9 721 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 MKRN2Q9H000 416 aaKnown RBP10.08□□□□□ -0.8
YBX3-211ENST00000541351 ASB7Q9H672 318 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 FBRSQ9HAH7 460 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 PLEKHB1Q9UF11 243 aaPredicted RBP10.08□□□□□ -0.8
YBX3-211ENST00000541351 C2CD2Q9Y426 696 aa10.08□□□□□ -0.8
YBX3-211ENST00000541351 MYLKQ15746 1914 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 NEDD8-MDP1E9PL57 170 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 OGTO15294 1046 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 MAGEC1O60732 1142 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 FSBPO95073 299 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 OAS1P00973 400 aaKnown RBP10.07□□□□□ -0.8
YBX3-211ENST00000541351 EPHA8P29322 1005 aaPredicted RBP10.07□□□□□ -0.8
YBX3-211ENST00000541351 GUCY2FP51841 1108 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 FOXK1P85037 733 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 DAB2P98082 770 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 ARID5AQ03989 594 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 ZBTB16Q05516 673 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 NPY5RQ15761 445 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 BLOC1S2Q6QNY1 142 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 FAM124AQ86V42 546 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 ATCAYQ86WG3 371 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 BIRC7Q96CA5 298 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 ERLEC1Q96DZ1 483 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 ZBTB45Q96K62 511 aaPredicted RBP10.07□□□□□ -0.8
YBX3-211ENST00000541351 NACA2Q9H009 215 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 RNF38Q9H0F5 515 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 ABCG4Q9H172 646 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 LHX5Q9H2C1 402 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 BHMT2Q9H2M3 363 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 SGK2Q9HBY8 427 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 ASCL3Q9NQ33 180 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 DDX43Q9NXZ2 648 aaKnown RBP10.07□□□□□ -0.8
YBX3-211ENST00000541351 MAGEC2Q9UBF1 373 aaPredicted RBP10.07□□□□□ -0.8
YBX3-211ENST00000541351 ATXN7L1Q9ULK2 861 aaPredicted RBP10.07□□□□□ -0.8
YBX3-211ENST00000541351 PCDHB1Q9Y5F3 818 aa10.07□□□□□ -0.8
YBX3-211ENST00000541351 CBX4O00257 560 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 SCAMP3O14828 347 aaKnown RBP10.06□□□□□ -0.8
YBX3-211ENST00000541351 PPEF2O14830 753 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 TSPAN3O60637 253 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 MED24O75448 989 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 ADRB2P07550 413 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 TYRP14679 529 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 ITGB6P18564 788 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 LIG4P49917 911 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms